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SCN18_10_11_15_R5_B_scaffold_32_5

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2808..3440)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ47_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 205.0
  • Bit_score: 173
  • Evalue 1.80e-40
Bacterial regulatory proteins, tetR family {ECO:0000313|EMBL:CEJ13993.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 211.0
  • Bit_score: 324
  • Evalue 8.70e-86
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 205.0
  • Bit_score: 173
  • Evalue 5.00e-41

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGCCTCCCGTCCTCCCGTTTCCAACCTCGCCGCGCGGCGCGGCTATCATCACGGCAATCTCAGGGAAGCGCTGATCGAGGCGGCGCGGCGGCTGATCGCCGAGCGTGGGCCGGCTGGCTTCACCCTGTCGGACGCGGCCAAGCTCGCCGGTGTTTCGCCTGCGGCGCCCTACCGGCATTTCAAGGACCGCCAGAGCCTGCTGCGCGAGGTCGCGCATCTCGGTTTCGCGGCGCTCGGCGAGCGGCTGGGCACGGCCGCGGCCGGCGGCGGGGTGTCCGGGTTCAACGCCATGGGACGGGCCTATCTCGCCTTCGCCCGCGAAGAGCCGGCCTATTATGCCGCCATGTTCAATACCGGCATGGCGGCGGAGGAGGCGACATCGACGGCCGAGGACCCGGGCTTCGCCATGCTGCGCAAGGCGGTCGGCCGGGCGCTGGGCGTCGACGACCCGGAGACGGTACGCACCGCGGCCATCCTGGTCTTCGCGCTGACCCATGGCCTCGCCGGCCTGTCCGCACCGGGTTCCGTCGCCCGCCCGCGGGACCTCGTCGATGCCGAGCGAATGCTCGATCTCGGCGTCGGCGCCATGCTGCGCGGACTGCCGGCCGCAATGGGTGGGGGTAAGCGTTGA
PROTEIN sequence
Length: 211
MASRPPVSNLAARRGYHHGNLREALIEAARRLIAERGPAGFTLSDAAKLAGVSPAAPYRHFKDRQSLLREVAHLGFAALGERLGTAAAGGGVSGFNAMGRAYLAFAREEPAYYAAMFNTGMAAEEATSTAEDPGFAMLRKAVGRALGVDDPETVRTAAILVFALTHGLAGLSAPGSVARPRDLVDAERMLDLGVGAMLRGLPAAMGGGKR*