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SCN18_10_11_15_R5_B_scaffold_111_11

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 11677..12402

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, GntR Family n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3H2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 225.0
  • Bit_score: 243
  • Evalue 2.10e-61
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:CEJ15273.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 241.0
  • Bit_score: 392
  • Evalue 3.90e-106
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 227.0
  • Bit_score: 243
  • Evalue 5.90e-62

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGTCGCAGGATGAGCCACGATGGGGCAGGGCGCCGCGCGGCCGTACGGCCGCGGAAGAGGTTTATCTGGCGTTGCGCGACGACATTGTTTCGCTCGCCCGCAAGCCCGGCTCCCAGGTCAATGAAAAAGCCATAGCGCTCGCCCATGGCGTCAGCCGCACGCCGGTGCGCGAGGCCATTTTGAGGCTCGCGGGCGAAGGCCTGATCGACGTCGTCTCGAAGGCCGGCACCTATGTCTCGCGCATCAGGCTGTCGGCGCTCGCCGAGACCATCGTCGTGCGCAAAGCACTCGAAGAGGTGACGGTGCGGGCCGCCGTGGCCAATGCCACGACTAGCCAGATCATCGGCCTGCGCGCCATCCTGACGCGCCAGATCGAGGCCGCCGCCGCCGGCGACCAGAGCGCCTTTCACGCCGCCGACGAGGCCTTTCACGAGGCCATCGCACGGGCCGGCGGCTTTCCGGGGATCTGGACCCTGGTGCAGAACGTCAAGCTGCAGGTCGATCGCTATCGCCGGCTGACCTTGCCGCAGCCCGGCCGCATGGCGCTGGTCATCGGCGAACACACGGCAGTCCTAGACGCCATCGAGGCGCGTGCCGCCGACGCCGCGGCCGAGGCCATGGGCCGGCACATTGCCGGCCTCGACGTCAACCTGGCGGAGATCCGCCGGATCAACCCCGATCACTTCGAGGAGGATGCGGCGGCCATCGAACGCTTCGTCGCCTGA
PROTEIN sequence
Length: 242
MSQDEPRWGRAPRGRTAAEEVYLALRDDIVSLARKPGSQVNEKAIALAHGVSRTPVREAILRLAGEGLIDVVSKAGTYVSRIRLSALAETIVVRKALEEVTVRAAVANATTSQIIGLRAILTRQIEAAAAGDQSAFHAADEAFHEAIARAGGFPGIWTLVQNVKLQVDRYRRLTLPQPGRMALVIGEHTAVLDAIEARAADAAAEAMGRHIAGLDVNLAEIRRINPDHFEEDAAAIERFVA*