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SCN18_10_11_15_R5_B_scaffold_111_13

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 13630..14214

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctQ-like membrane protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSG0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 147.0
  • Bit_score: 133
  • Evalue 1.40e-28
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM {ECO:0000313|EMBL:CEJ15271.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 184.0
  • Bit_score: 313
  • Evalue 1.80e-82
Tripartite ATP-independent periplasmic transporter DctQ component similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 170.0
  • Bit_score: 121
  • Evalue 2.10e-25

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Taxonomy

CN-SCN_Lautropia_15x → CN-SCN_Lautropia_15x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACAGATGTCGCGAAAGTGACGGATATCGCGAGAGCGCCGTCGGAACCCACCGAGGACGTCCATCTGATCGTCGCCGAGGACGAGGAAGTGACGGTCGAATATTTCCTGGAGGATTGGCTGTCGATCGCCCTGTTCTGGGCGCTTGCCTTCATCATCTTCCTGCAGTTCTTCACCCGCTACGTGCTGAACGACAGCCTGGCCTGGACCGAGGAGATCGCGCGCTACCTGCTCATGATCCTGGTCTTCGTCGGCGGCGCCATGGTGATGCGGCGCAACACCAACATTTCGGTCGAGCTGGTGATGAACGTCATGCGCGATGGCTGGCCGCGGCGGGTGCTGATCGCGGCGGTCGAGGTCACCAAGCTGTTCTTCGTCTCGTTGCTCGCCTATTTTTCCGTGCTGATCACCGAGCGCATGCACGGCCTCTACATGACCGTCATCGATTGGCCGATGTCGCTGGTCTATGGCGGCATCGCCATCGGCTGTTTCCTGATGGTGTTCCGTCAGGCCATGAACCTGCTGCGCGAGGCCCGCAACGGCTTCCGGCGTCCATCCGCCCAGTCCCTGTCCGACGTCGATTGA
PROTEIN sequence
Length: 195
MTDVAKVTDIARAPSEPTEDVHLIVAEDEEVTVEYFLEDWLSIALFWALAFIIFLQFFTRYVLNDSLAWTEEIARYLLMILVFVGGAMVMRRNTNISVELVMNVMRDGWPRRVLIAAVEVTKLFFVSLLAYFSVLITERMHGLYMTVIDWPMSLVYGGIAIGCFLMVFRQAMNLLREARNGFRRPSAQSLSDVD*