ggKbase home page

SCN18_10_11_15_R5_B_scaffold_92_16

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 15077..16117

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GWP6_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 308.0
  • Bit_score: 276
  • Evalue 1.90e-71
HTH-type transcriptional regulator SyrM 1 {ECO:0000313|EMBL:CEJ10234.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 309.0
  • Bit_score: 501
  • Evalue 5.00e-139
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 308.0
  • Bit_score: 276
  • Evalue 5.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
TTGTGGGTATCCGGCAACCCCGGAGGCAACGGCCGCCTCAAGCGATCCGCCACCGCTCTGGCCCCGGGGCCGCCAGCCGACTATGCTCGGCTGGCTATGGATGCCATGCTGTTCCGGGATGTCGCCGATATCAGCTTCCGCCAGCTGCGCGTGCTGCACGTGCTGATGGTCGAGAAGAGCCTGACGCGTGCCGCGACCCTGCTCGGCACGACGCAGCCGGCGATCAGCAAGGTGCTGGCCAAGCTCCGGCTGGAATTCCAGGATCCGCTCTTCGTCCGGGTCGGCGCGACCATGCAGCCCACCCCGAAGGCCGTGCTGCTGGCCGAGCCGCTGCGGACCTTGCTGACCCAGGCCGAAGCGCTCGGCCGCACGCCCATGCGTTTCGACCCGGCCTCCTCGCTCCGGCAATACCGGCTCCTGGTCAGCGATGTCGGCCAATTGCGTTTCCTGCCGCCCTTGATGAACGCGCTCGCGACCCAGGGCCCGCATGTCCAGCTGGTCGCGCTGCCGCTCGACATGAGGCAGTTCCAGGCCCAGCTCGAAACCGGCGTGGCGGATGTCGCGCTCGGCGCCTTTCCGCGCGCCACGCAGGGCCTCAGGCGTCAGCGGCTCTATAGCGAGGGCTATCTGAGCGTCGCGCGCGCCGACCACCCGCGGCTCGCGCAATTGACCAGCCGGGCCGGCTTCCTCGCCGAGCGCCACATCATCGTGGCGGCGTCCTATACCGGCCATGGCGCCCATGTCATGGCCGAACAGGCCCTGGCCACCGAGATCCCCGCCGACCGGATCGTCCTGAGCGTGCCGAGCTTTGTCGGCGCAGCGCTGGCCGCGGCGCGCGGCCAGGCGATCGCCACCTTGCCCGGGCGGTTCGCCCAGGATTTCGGCCGCGAGCTCGGCCTCGTCGCCTTCCGCCCGCCGCTGATGCTGCCGAAGATCGAGATCGCGCAATATTGGCACGAACGCTATCACCGCGACCCGGGCCATCAATGGCTGCGTGCCCTGGTGCATCGGACCTTCGGCGCCTCGACCCGCTCGGACTGA
PROTEIN sequence
Length: 347
LWVSGNPGGNGRLKRSATALAPGPPADYARLAMDAMLFRDVADISFRQLRVLHVLMVEKSLTRAATLLGTTQPAISKVLAKLRLEFQDPLFVRVGATMQPTPKAVLLAEPLRTLLTQAEALGRTPMRFDPASSLRQYRLLVSDVGQLRFLPPLMNALATQGPHVQLVALPLDMRQFQAQLETGVADVALGAFPRATQGLRRQRLYSEGYLSVARADHPRLAQLTSRAGFLAERHIIVAASYTGHGAHVMAEQALATEIPADRIVLSVPSFVGAALAAARGQAIATLPGRFAQDFGRELGLVAFRPPLMLPKIEIAQYWHERYHRDPGHQWLRALVHRTFGASTRSD*