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SCN18_10_11_15_R5_B_scaffold_220_30

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(40398..41219)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q166U6_ROSDO similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 272.0
  • Bit_score: 375
  • Evalue 3.00e-101
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 272.0
  • Bit_score: 375
  • Evalue 8.60e-102
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ABG31997.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter; sp. (strain OCh 114)) (Roseobacter denitrificans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 272.0
  • Bit_score: 375
  • Evalue 4.30e-101

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGGCGCAACGCTCGACCGCAGCCGACATCAGCTATACCTGGACGATCGGGCTGATCGCGGCGCTGGCGATCCTGATCCTGGTCGGGCCGGTGCTGATCGTGCTTGCCACCTCGTTCACCACCTCGGCGACGCTGAAATTTCCGCCGCCGGACCTGTCGCTGCGCTGGTATCGCGAGCTGTTCGATACGGCGCGCTCGGCGCAGATCCACCGCGCCGCCGGCAACAGCCTGTGGGTCGCCGGCCTGGCGACCGGCATCGGCGCCATCCTGTCGGTGCTGGCCGCGCTGTCGATCGCCCGGATCAACCGGCCCTCGGCCCGCGCGCTGGAGGCGAGCTTCCTGTCGCCGCTGGTGCTGCCGACGCTCGCCTATGGCCTGGCGACCCTCATGTTCTTCTCGTTCCTGGGCTTGCGGCCGTCGCTCAACCTGCTGATCGCCGGCCATCTTGTGGTGATCGCGCCCTTCGTCTTCCGCACCACGCTTGCAAGCCTGACCCAGCTCGATCCGGTGCTGCTCGAATGTTCGGCAAGCCTCGGCGCCAGCCGCTTCTATGCGTTCCGGCGGATTACCTTGCCCTTGATCGCGCCGGGCATCGCCGCCGGGGCCTTCCTCGCCTTCATTTCCTCGATGGACAATGTCCCGGTCTCGCTGTTCCTGTCGAATGCGCGCACCGACATGCTGCCCATTCGCCTGTGGGGGATGATGGAATCGACCCTCGATGTGAGGATCGCCGCGGTGGCCGGCGTGCTGATCGCCGCCACCCTCGTGCTGATGATCGCCATGGACCGGCTGACCGGCCTGACCAGGCGGATCAGCGGCTGA
PROTEIN sequence
Length: 274
MAQRSTAADISYTWTIGLIAALAILILVGPVLIVLATSFTTSATLKFPPPDLSLRWYRELFDTARSAQIHRAAGNSLWVAGLATGIGAILSVLAALSIARINRPSARALEASFLSPLVLPTLAYGLATLMFFSFLGLRPSLNLLIAGHLVVIAPFVFRTTLASLTQLDPVLLECSASLGASRFYAFRRITLPLIAPGIAAGAFLAFISSMDNVPVSLFLSNARTDMLPIRLWGMMESTLDVRIAAVAGVLIAATLVLMIAMDRLTGLTRRISG*