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SCN18_10_11_15_R5_B_scaffold_231_28

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(31143..32336)

Top 3 Functional Annotations

Value Algorithm Source
Bifunctional enzyme IspD/IspF n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYH8_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 387.0
  • Bit_score: 463
  • Evalue 1.20e-127
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 397.0
  • Bit_score: 612
  • Evalue 2.30e-172
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 387.0
  • Bit_score: 463
  • Evalue 3.50e-128

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGAAACCGACCAGGACAATTGCCGCGCTGATCGTCGCGGCCGGGCGTGGCAGCCGCGCCGGCGACGGCGTCCCCAAACAATACCGCCCGATCGGCGGAAAGCCGCTGCTCGCCCATGCGTTGGCGGTCTTCGCCGGCCACCCCGCGATCGCCACGGTCAGGGTGGTCATCGATCCCGCCGACGCGACGCTTTACGCCGAATCGATCGCGGCGGCCCCTGTCCTCGGACCGCCCGTGCCTGGCGGCGCGACCCGCCAGGCCTCGGTGCTCGCCGGGCTATCGGCGCTGGCCCTGGACCCGCCCGACATCGTGCTGATTCATGATGCCGCCCGGCCCTTCGTCTCCGCCGAGCTGATCGACCGCGCTTTGGCCGCCATGGCCGAACCCGGTGTTCTCGCCGCGGTGCCGGGCACGCCGGTGGTCGACACGATCAAGACCGTCGACCTCGCCGAACAGGTCACCGGCACCCCTGCCCGTCCGCAATTGCGCGCCATCCAGACCCCGCAGGCTTTCGATTTCGCCGCCTTGCTGCAGGCTCACCGCAACGCCGCGGCACAAGGCGACGCGGCGGCGACCGACGACGCGGCCGTGATGGAACGCGCCGGCCATGCCGTGCGGGTCTTCGCCGGCGATACCGCCAATGTGAAGCTGACCTATCCGCTGGATTTCGAAGCCGCAGAGCGCCTGATGACCCGAACCATCGCGATGAACGACCTGCGCGTCGGCCAGGGCTACGACGTCCACGCCTTCGGCCCGGGCGACCATGTCTGGCTCGGCGGTGTCCGGATCGCCCATGATCGCGGCGTGCTCGCCCATTCCGACGGCGACGTCGTTCTGCACGCCGTGACCGATGCCCTGCTTGGCGCTATCGCCGATGGCGATATCGGCAGTCATTTCCCGCCGAGCGATCCGCAATGGCGCGGCGCTTCTTCCGACCAGTTCCTGGCCCATGCCGGCGCCCGGGTCGCCGCGCGCGGCGGCCGGATCGGCAATATCGACATCACCATCGTCTGCGAGGCGCCGCGGGTCGGGCCGCATCGCGACGCCATGCGCGCGCGCATCGCGGAGATCCTGGGCCTGGCCGCGGAACGCGTCGCCATCAAGGCGACGACCAGCGAGCAAATGGGCTTTACCGGCCGGCGCGAGGGCCTCGCCGCCCTGGCGGTGGCGAGCATCAGGCTCCCGGGCGAATGA
PROTEIN sequence
Length: 398
MKPTRTIAALIVAAGRGSRAGDGVPKQYRPIGGKPLLAHALAVFAGHPAIATVRVVIDPADATLYAESIAAAPVLGPPVPGGATRQASVLAGLSALALDPPDIVLIHDAARPFVSAELIDRALAAMAEPGVLAAVPGTPVVDTIKTVDLAEQVTGTPARPQLRAIQTPQAFDFAALLQAHRNAAAQGDAAATDDAAVMERAGHAVRVFAGDTANVKLTYPLDFEAAERLMTRTIAMNDLRVGQGYDVHAFGPGDHVWLGGVRIAHDRGVLAHSDGDVVLHAVTDALLGAIADGDIGSHFPPSDPQWRGASSDQFLAHAGARVAARGGRIGNIDITIVCEAPRVGPHRDAMRARIAEILGLAAERVAIKATTSEQMGFTGRREGLAALAVASIRLPGE*