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SCN18_10_11_15_R5_B_scaffold_256_7

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(5800..6576)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=2 Tax=Pseudomonas putida RepID=E4RCD1_PSEPB similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 255.0
  • Bit_score: 305
  • Evalue 2.80e-80
Transcriptional regulator {ECO:0000313|EMBL:ETR78303.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 259.0
  • Bit_score: 343
  • Evalue 2.20e-91
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 255.0
  • Bit_score: 305
  • Evalue 7.90e-81

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCAATTCTGGCGGTCAAATCGGCGGCGCGAGCAGTCGAGGTCCTGGAATATTTCGGCCATGTGCGCGAGCCGAAATCACTGAAAAGCATCTGCGAGAGCCTGCAATATCCGCAATCCAGCACGACCGTGCTGCTGAAGACCCTGACGTCGATGGGGTACCTGAACTATGACCGGCGGCTGCGCGTCTATTTCCCCACGCTGAAGGTGACCGCGCTCGGCGACTGGGTGCCGCAGGCCCTGTTCGGCAATGGCCGGGCGCTGGAGGCGATGCGCGACGTTCACAGCGCGACCGGCGAGACGGTGTCGATCGCGGTCAAGAACGACATTTATTTCCAGTACATCAAGGTCATCCAGTCGGTGCACGCGCTGCGCTTTCACGTGGCTGAGGGAACCATGCGCCCGCTCACCCAGTCGGCCGTCGGCTGGCTGCTGATGTCGACGTTGCAGGGCGACGAACTCGACAATGTCATCCGCAGGGCCAATATCGCCGCCGGCAAGGCGGAGACGGTGAAGGTCTCCGACATGCTGGCGACGGTGGCCGAGACCCGGCGCCTGGGCTATTCGGCGGCCGAGAACGTACCCTTCCTCGGCGGCGGCACGTTGTGCGTCCTGCTGCCGATGACCATTCAGGGCCAGCCGGTGGTGCTCGGTCTGGGCGGTTCGCTGGAGCGCATCCGGGCCAATCGTGCGCGCTACCTGACGGTGCTGAAGCGCTGCGCCAGGGAATTGCGCGGCCATGGCGCAGGCGAGGGGCCGATCGACATCGAGTTCTAG
PROTEIN sequence
Length: 259
MAILAVKSAARAVEVLEYFGHVREPKSLKSICESLQYPQSSTTVLLKTLTSMGYLNYDRRLRVYFPTLKVTALGDWVPQALFGNGRALEAMRDVHSATGETVSIAVKNDIYFQYIKVIQSVHALRFHVAEGTMRPLTQSAVGWLLMSTLQGDELDNVIRRANIAAGKAETVKVSDMLATVAETRRLGYSAAENVPFLGGGTLCVLLPMTIQGQPVVLGLGGSLERIRANRARYLTVLKRCARELRGHGAGEGPIDIEF*