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SCN18_10_11_15_R5_B_scaffold_36_18

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(20605..21669)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J2KWC4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 341.0
  • Bit_score: 330
  • Evalue 1.10e-87
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM33149.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 330.0
  • Bit_score: 349
  • Evalue 5.50e-93
nitrate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 344.0
  • Bit_score: 347
  • Evalue 4.20e-93

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGGGAAAACCAGGGCCAGATCGTTCGCTTGTGTCGTCGCCGAGCCGCCGCGACATGCTCCGCGCGTCCGCCGCGACCTTGGCCGGGCTCGGCCTCGGCGGCGGCGCGCTTGCCAGTATCGGGCCGGCCGATGCCCAGGGGCTGACCGCCCTCAAGGTCCAATATGACTGGCTGATGAGCAATGGCCAGATCGGCGACGTGATCGCCGAGAAGAAGGGTTTCTTCGCCGAACAGGGCTTGAACGTCAGTTTCGTGCCCGGCGGCCCGAACGCCCAGACCGTGCCGCCGGTGCTGACCGGCCAGGCGCTGGTCGGCCAGCTCTCCGGCACCTCTCAGGCCCTGATGGCCTATGGCGCGGGACGCCCGGTGAAGATGTTCGCCTGCGGCTATCAATATTCGCCTTATGCCTTCATCTCGCTGCCGCGCGCACCGATCCGCATCCCCTCCGACTTCGTCGGCAAGACGGTCGCCGTACAGCCCACCGGCCGCTTCATCCTGGACCTGATCCTGGCGCAGCACCGGATCGACCCAGCCAAGGTCAGGGTGGTCAATATGGGCCACGACATGACCGCGCTGACCACCGGCCAGGTCGATGCCGTCACCGGATTCATCACCAATACCAAGGCCATGCAGGTGGTCGGTCCGGACCGGATCGTGATGACCTCGGAATCGGCGGGCATCACCAATTACGCCAATGCCTATTTCACCTCGTCCGAGACCTATGAGGCGCAGAAGCCGGTGCTGGCCCGCTTCATCAAGGCGGTCGCCAAGGGCTGGGGCTGGGCGTTCCAGAACCGGGCAGAGGCGATCGACATTCTTTGCGACACCTATCCCAATCTCGACCGGGAGATTGAACGGGCGACCGTCGACATCGTCATGGAAATCTCGTTCGACCGGATCACCCGGACCAAGGGCTGGGGCTGGTTCGAAGCGGAGCGGATCGAACGGCAGATCAAGCTGTTCGACAGCATCAAACGCTTCGAGACCCGGGTGCCTGATATCGCCGGCTTCGCCACCCATGACATTCTCGACATGACCGCCGATGCGCGGCCGCGACTGGGCTGA
PROTEIN sequence
Length: 355
MGKPGPDRSLVSSPSRRDMLRASAATLAGLGLGGGALASIGPADAQGLTALKVQYDWLMSNGQIGDVIAEKKGFFAEQGLNVSFVPGGPNAQTVPPVLTGQALVGQLSGTSQALMAYGAGRPVKMFACGYQYSPYAFISLPRAPIRIPSDFVGKTVAVQPTGRFILDLILAQHRIDPAKVRVVNMGHDMTALTTGQVDAVTGFITNTKAMQVVGPDRIVMTSESAGITNYANAYFTSSETYEAQKPVLARFIKAVAKGWGWAFQNRAEAIDILCDTYPNLDREIERATVDIVMEISFDRITRTKGWGWFEAERIERQIKLFDSIKRFETRVPDIAGFATHDILDMTADARPRLG*