ggKbase home page

SCN18_10_11_15_R5_B_scaffold_36_24

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 26121..27035

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZIG5_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 304.0
  • Bit_score: 330
  • Evalue 1.60e-87
Transglycosylase SLT domain protein {ECO:0000313|EMBL:CEJ12064.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 294.0
  • Bit_score: 473
  • Evalue 1.30e-130
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 304.0
  • Bit_score: 330
  • Evalue 4.60e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCCTGACCAGGGTGAAGCCTTGAAACGCCGCCGCTTCGGCCCGCTTGCGATCGTATCGGCGCTCTGGCTCGCTGCGACCGGCCTTGCACTCACGCCGACACGGGCCCATGCGCAGGCGGCCGATGGCGAGACGCTGGAACAGACACTCTGCCGGCTGATCGAGACCGGAGCGCGGCGGCATAACCTGCCGGTGCATTTCTTCACCCGCCTGATCTGGGCGGAGAGCAGCTTCCGGATCGGCGTGGTGAGCCCGGCCGGCGCCCAGGGCGTCGCGCAATTCATGCCCGGCACGGCGCGCGAGCGCGGCCTCGCCGACCCCTTCGACCCGGAACAGGCGATCGCCGCCTCGGCCGCCCTGCTCGCCGATCACGTCCGGCAATTCGGCAATCTCGGCCTCGCCGCCGCCGCCTACAATGGCGGCCCGACCCGGGTGGCCAATTTTCTGGAGGGCCGGGGCGGCCTGCCCGCCGAAACCCAGGACTATGTCTACAAGATCACCGGGCGCACGGCCCAGGACTGGGTCGAGGAGGTCAGGCGCGCGGCACCGCCGGCCGGCGTCCTGCAGGACCATCCACAGCAGGCCTGCCTGCAGGTTACCGCGCTGCTGCGCCGGCCCGGCGGTAGCCTGGCTGCCGTCGAAGGCCCCTTTGCTCCCTGGGGCGTGCAGCTCGCCGGCCATTTCTCCAAGGCCATCGCCTTGGCGAGCTATGGCCGCGCGCGGGCAAGGCTCGCCGGTATTCTCGGCGATACCCAGCCGATGATCATCGGCTCGCGCCTGCGCAGCCGCGGTTCGAGCACATTCTACCGGGTCCGCGCGCCTGCCCCGACACGCCGGGCGGCCGATGCGCTCTGCGACCGGATCCGCGCCGCCGGCGGCGCCTGTATCGTGCTGAGGAATGGCGGCCGGACCTGA
PROTEIN sequence
Length: 305
MPDQGEALKRRRFGPLAIVSALWLAATGLALTPTRAHAQAADGETLEQTLCRLIETGARRHNLPVHFFTRLIWAESSFRIGVVSPAGAQGVAQFMPGTARERGLADPFDPEQAIAASAALLADHVRQFGNLGLAAAAYNGGPTRVANFLEGRGGLPAETQDYVYKITGRTAQDWVEEVRRAAPPAGVLQDHPQQACLQVTALLRRPGGSLAAVEGPFAPWGVQLAGHFSKAIALASYGRARARLAGILGDTQPMIIGSRLRSRGSSTFYRVRAPAPTRRAADALCDRIRAAGGACIVLRNGGRT*