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SCN18_10_11_15_R5_B_scaffold_9_11

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(11517..13826)

Top 3 Functional Annotations

Value Algorithm Source
GGDEF/EAL domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JDG4_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 750.0
  • Bit_score: 681
  • Evalue 9.50e-193
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:CEJ14193.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 769.0
  • Bit_score: 1152
  • Evalue 0.0
ggdef domain similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 750.0
  • Bit_score: 681
  • Evalue 2.70e-193

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2310
ATGAACATTCGTGCCGAGACGACGAACGAGACGAAGCGCGATTTCCCCGTCGAGATCTATATCGCGATGGTGGATGCGCTTTACGCCGACGTGCGGACTTTTCTGTTCGGTGCGCTGACCGCCTGGGTGGCGGCGCTTTATGCTGCCTATCTCACGCCGGTCCTCATTCTCGATGGCTTCGCCATCGCGCTCGGCCTGGTCAGCCTCGCCCGCACGCTGCACATCATGTCGTACCGGCGCGCGCGGGCCGATGTGGTCACCTATGAGGCGGCGCGGCGCTGGGAGCGCGCCTATACGATCGGCGCCAATGCCTATGTCTTCATGCTCGGGCTGTGGTGTTTCGCAAGCTTCGCCCTGACCTCCAGCGTGGTGGCGCAGCTGTTCAGCATGTCGCTGGTGCTCGCCCATATGGTCGGGGTCACCGGGCGTAATTTTGCCAATGGCCGTTTCGTCGACACCCAGAGCGTCTTGCTGGCGGTGCCGGTCATTTCGGGCCTCCTGGTCACCGGCAATGTCGATCACATCGTGCTGGCCCTGTTCTTCGCGCCGTTCTTCGTCAGCACGCGCAGCGTCGCGGCCCGGCTCAGGAACATCCTGCTCGACGCGGTCATCGCCAAGCGCGACGTCGAGCTGCTGGCGACCCGCTTCGACACGGCTTTGAACAACATGCCCCATGGCCTGGCCATGTTCGACGCGGCCGGCCGGCTGGTCGTCGTCAATGCGCGCTGGGGCGAGATGCTGCATGGCGACCCCGACAGCCTTGTTTCGGGCGCGCGGGTCGACGCCATCGTGGCCGGTTACGTCGAAAGCGGCGTGATCAATCCGCATGACGCCAGCCGCATCATGGAGATGGTGCGGCGGCGTGCCGGCGACCGGTCGATGAACCGGCTCGAAGTCGAGACCAATGAGTGCCACATCGACGTGGCGTTCCAGCCGATGGAGAATGGCGGCCTGGTGATCGTCATCGAGGACATCACCGAGAAGCGCCGGACCGAGGCGCGGATGGCCCATATGTCGCGGCACGACGCGCTCACCGGCCTGCCCAACCGCATCCAGTTCCAGGAGCGCCTCGAACTGGCGCTGACCATGCGCACCGACAGCGACATGCTGGCGGTGCTGTTCGTCGATCTCGACAATTTCAAGCAGGTCAACGACACGCTGGGCCATCCGATCGGCGACACGCTGCTGATCGAGGTGGCCGACCGGCTGCGCTTCGTCGTCGGCGAGACCAATGTCGTGGCGCGTTTCGGTGCTGACGAATTCGTCGTGCTGCAAAGCGGCGTGCGCACCGTCAACGAGGTCGCCAAGCTCGCCGGCCGGATCATCGAGAACCTGTCGGACATGGTCCAGATCGAAGGTTCGACGGTGGTCTGCGGTGCCTCGATCGGCATTGCGCTGGCGCCCCGCGACGGCACCGATCCGGGCCAACTGCTGAAATGCGCCGACATGGCGCTGGCGCGCGCCAAGGCCGGGGGCAAGGGCATCCTGCATTTCTACGAGGAGGAAATGGATCGCCAGGCCCAGGCCCGGCGCGCCACCGAACTCGATCTGCGCAAGGCGATCCACAACGAGGATCTGGCGGTCTATTTCCAGCCGTTGCTGAACCTGAAATCGCTGACCATCACGACCTGCGAGGCGCTGGTGCGCTGGCCGCATCCGACCCGCGGCATGGTCTCGCCGGCCGAGTTCATTCCGATCGCCGAGGAAACCGGCCTGGTCGTCGAGCTTGGCCGTCAGGTGCTCAGAAAGGCCTGCGCGGCCTGTGCCGCCTGGCCGAACGACGTCAGGTTCGCGGTGAACCTGTCGTCGGTGCAGTTCGACCGCGACGACGTGGTGGCGCTGGTCCGCGAGACGCTCGAGGTCACCGGCCTGAGCGCCGACCGGCTGGAGCTGGAAATCACCGAGACCTTGCTGCTGCAGGACTCGGCCTCGATCCTGGCCACTCTCGAGACCTTGCGCAGCATGGGCGTCAGGATTGCACTCGACGATTTCGGCACCGGCTATTCCAGCCTGAGCTATCTGCAGAAATTCCCGCTGCAGAAGGTCAAGATCGATCGCTCCTTCGTACGCAACCTGGAAACCGATACCCGCGCAGTCAAGCTGCTGCAGGGCGTGACCCGGCTCGGCGCCGATCTCGGCCTGTCGGTCGTCGTCGAGGGGGTCGAGACCTATACCCAGATGAAGCTGATCGACGAGCCCGGCGTGGTGACCGAGATCCAGGGCTTCCTGCTCAGCCCGGCCATTCCCGATGCGCAATTGCGGATGCTGCTCTGCCGCTCGGGCGAGGGGCTGCTCAAGAAGGTCGCCTGA
PROTEIN sequence
Length: 770
MNIRAETTNETKRDFPVEIYIAMVDALYADVRTFLFGALTAWVAALYAAYLTPVLILDGFAIALGLVSLARTLHIMSYRRARADVVTYEAARRWERAYTIGANAYVFMLGLWCFASFALTSSVVAQLFSMSLVLAHMVGVTGRNFANGRFVDTQSVLLAVPVISGLLVTGNVDHIVLALFFAPFFVSTRSVAARLRNILLDAVIAKRDVELLATRFDTALNNMPHGLAMFDAAGRLVVVNARWGEMLHGDPDSLVSGARVDAIVAGYVESGVINPHDASRIMEMVRRRAGDRSMNRLEVETNECHIDVAFQPMENGGLVIVIEDITEKRRTEARMAHMSRHDALTGLPNRIQFQERLELALTMRTDSDMLAVLFVDLDNFKQVNDTLGHPIGDTLLIEVADRLRFVVGETNVVARFGADEFVVLQSGVRTVNEVAKLAGRIIENLSDMVQIEGSTVVCGASIGIALAPRDGTDPGQLLKCADMALARAKAGGKGILHFYEEEMDRQAQARRATELDLRKAIHNEDLAVYFQPLLNLKSLTITTCEALVRWPHPTRGMVSPAEFIPIAEETGLVVELGRQVLRKACAACAAWPNDVRFAVNLSSVQFDRDDVVALVRETLEVTGLSADRLELEITETLLLQDSASILATLETLRSMGVRIALDDFGTGYSSLSYLQKFPLQKVKIDRSFVRNLETDTRAVKLLQGVTRLGADLGLSVVVEGVETYTQMKLIDEPGVVTEIQGFLLSPAIPDAQLRMLLCRSGEGLLKKVA*