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SCN18_10_11_15_R5_B_scaffold_82_7

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 6652..7170

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 172.0
  • Bit_score: 315
  • Evalue 4.30e-83
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 170.0
  • Bit_score: 249
  • Evalue 5.80e-64
Peptide deformylase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TML5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 170.0
  • Bit_score: 256
  • Evalue 9.90e-66

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCCATTCGCGACATCATTTCCATTCCCGACCCGCGGCTCCGGCTCGTCAGCGAGCCGGTCGAGCGCATCGACGACGAGATCAGGACGCTCGCCGCCGACATGCTCGACACCATGTACGAGGCACCCGGCATCGGGCTCGCGGCGATCCAGATCGCCGTGCCGAAACGGCTGTTCACCATCGACCTCGCCCGCAAGGACGAGGAGAAGAAGCCGATGGTGCTGATCAATCCCGAGATCACCTTCACCTCCGAGGACATGGCCGTCTACGAGGAGGGCTGCCTCTCCATCCCCGAATATTACGAGGAGGTGGAGCGCCCGGCGCGCTGCGGCGTGCGCTATCTCGACCTCGAGGGGCGCACCGTCGAGATGATGTGCGAGGGCCTGCTGGCGACCTGCATCCAGCACGAATTCGACCATTTGAACGGCGTCCTGTTCATCGACTATCTGTCGCGCCTGAAGCGCGACCGGGTGGTCAAGAAGTTCACCAAGGCCGCCAAGCGCGAGGCCATCGGGTGA
PROTEIN sequence
Length: 173
MAIRDIISIPDPRLRLVSEPVERIDDEIRTLAADMLDTMYEAPGIGLAAIQIAVPKRLFTIDLARKDEEKKPMVLINPEITFTSEDMAVYEEGCLSIPEYYEEVERPARCGVRYLDLEGRTVEMMCEGLLATCIQHEFDHLNGVLFIDYLSRLKRDRVVKKFTKAAKREAIG*