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SCN18_10_11_15_R5_B_scaffold_84_39

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(30657..31871)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EQV6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 406.0
  • Bit_score: 516
  • Evalue 1.20e-143
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:KFC66853.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 400.0
  • Bit_score: 592
  • Evalue 3.30e-166
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 403.0
  • Bit_score: 470
  • Evalue 3.80e-130

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Taxonomy

Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGACGACGCCCAAATTCACCCGCCGCGACGGCCTGATCGGCGCCGCGACACTTGCCGTGGGCTTCGGCCTCGGCGCCGCCCCGGCGCGCGCCCAGGGCGATATCAAGATCGGCTATAATGCCGACCAGTCGGCAACGGGAGCGGCCGAGCTCGGCCTGTCCGGCCGCTACGGCTTCGAGGCGGCGATCGAGGACGTCAACGCGGCCGGCGGCGTGCTCGGCCGCAAGCTCGTCGGCGTGATCAGGGACGATGTCGGCGCGCCGCCGAAATCGATCCAGAACATGCTCGAGCTGATCGACAACGAGAAGGTCGCCGCCGTCGTCGGTCCGACCAATTCGGGCAATGCGCTCGCCTGGCTGCACCTGCCACAGCAGAAGACGACGCCGGTGATTTCCCATGTGGCGACCGCCACCGAGATCACCACGCGTTATGCCTCGCAGCCGAAGAACTATATTTTCCGGGTCTCGATGGTCGATCGCGAACAGCTGGCTTTGCTTGCGGCCTATGCCGTGCGCGGCTCGAAGGCGGGCAAGATCGGCATCATCGCCGACACGACAGGTTATGGCCAGGCGGCGACCAAGGACCTCACCGAGATCCTGGCATTGCACGGCACGCGTCCGGTGGCGGTGGAGAAGTTCGGCCCGCGCGACACCGACATGACCTCGCAGCTCGCCAAGCTGCGCGATGCCGGCGCCGACATGGTGATCGCGGGATCGCTGGGCGATGCCAATGCCCATATTCTCAAGAGCATGGAGAAGATGGACTATTTCCCCGGCCTGCTCGGCACCTGGAGCAGCATCAACACGCCGCTGCTCAACATTGCCGGGCTGAAGCTCTCCGAGCGCATCGTGTTTGCCGCCTCGACCACCGAGAGCTCCAACCCCAGGGCCGCGGCGCTCAACACCCGCCTGGTCGCCAAATATCCGAACATGCCGGCCTTCGTTTCGGCCGCCCAGGGTTATGACGCGCTGATGCTGATCGCCGCGGCCATTCGCCAGGCGGGCTCGACCGAGGGGCCGAAGGTGCAGGAAGCCTTGGAAAATCTCGGCAAGGTCGAAGGCATCATCAAGACCTATGAGCGGCCGTTCTCGAAAACCAATCACGAGGCGCTCGGTGTCGCCGATTTCAACCTGGCGGTCTGGCGCGACGGCAAGGTGGTCAAGCTCGACGACGCCGTGACGAGGGCGCTGACGCCGGCGGATTTCAAGCGCTGA
PROTEIN sequence
Length: 405
MTTPKFTRRDGLIGAATLAVGFGLGAAPARAQGDIKIGYNADQSATGAAELGLSGRYGFEAAIEDVNAAGGVLGRKLVGVIRDDVGAPPKSIQNMLELIDNEKVAAVVGPTNSGNALAWLHLPQQKTTPVISHVATATEITTRYASQPKNYIFRVSMVDREQLALLAAYAVRGSKAGKIGIIADTTGYGQAATKDLTEILALHGTRPVAVEKFGPRDTDMTSQLAKLRDAGADMVIAGSLGDANAHILKSMEKMDYFPGLLGTWSSINTPLLNIAGLKLSERIVFAASTTESSNPRAAALNTRLVAKYPNMPAFVSAAQGYDALMLIAAAIRQAGSTEGPKVQEALENLGKVEGIIKTYERPFSKTNHEALGVADFNLAVWRDGKVVKLDDAVTRALTPADFKR*