ggKbase home page

SCN18_10_11_15_R5_B_scaffold_849_11

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(9548..10423)

Top 3 Functional Annotations

Value Algorithm Source
polar amino acid uptake family ABC transporter periplasmic substrate-binding protein (EC:4.2.1.51) similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 276.0
  • Bit_score: 277
  • Evalue 3.40e-72
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000363FFF3 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 290.0
  • Bit_score: 437
  • Evalue 6.90e-120
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKC24825.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 251.0
  • Bit_score: 285
  • Evalue 8.10e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Rhodobacter_64_50 → SCNpilot_P_inoc_Rhodobacter_64_50 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACATCAGTCGATCATATCAGGAGCGGCATTCTGGCCGTGGCGCTGGCGCTCGGGCTGGCGACCAGCGTCCAGGCGCAAGCGCCGGCCGCAGCACCCGCCACGCCCCAGGCCGACACCTTGCAGAAGATCCAGCGCGAGGGCGTGCTGAAAGTCGGCGTGCGTGCCGATTACCGGCCCTGGGGCTTCCGCAATCCGCAGGGCGAATTCGTCGGCCTGGAGATCGACATGGCCCGCGACATCGCCCGCACGCTCGGCGTGCGCGCCGAATTCGTGCCGGTGGTCGCCTCCAACCGCATGCAGTTCCTGCAGCAGGGCCAGACCGACCTGATGATCGCGACCATGTCCGACGTCGCCGACCGCCGGCGCGTGGTCGGCATCGTCCACCCGAACTATTATTCCTCCGGCTACAATATCATCATGCCGAAGACCGTCACGCCGGCGGCCTGGGAGGCGCTGCGCGGCCGCACGCTCTGCGCCATTCAGGGCGCCTGGTACAATCGGCCGGCGACCGAGCGTTTCGGCGTCGAGATCCTGGCCTTCACCGGCGTCTCGGAGGTCGAGACCGCGCTGGAGCAGCGCCGCTGCCTCGGCTGGATCTATGACGACAACCTGATCGCGGTGATGCTCGCCGATGCGTCCGGCCGCTGGAAGGATTTCCACCAGCCTTTGGCGAGCCAGAGCGACACGCCCTGGGGGCTCGCCGTGCGCCTGGAAGACCGTGACCGCGCCTGGGGCCGTTTCGTCGGCGGCATGGTCGCGGAATGGCACCGCACCGGCAAGCTCCTGGAATGGGAAAAGGCCGCCGGCATCGCCGAGAGCCCGTTCCTGCGTCGCATGCACGAGGCGCTGCGCGATCATATCAGGACCAATTGA
PROTEIN sequence
Length: 292
MTSVDHIRSGILAVALALGLATSVQAQAPAAAPATPQADTLQKIQREGVLKVGVRADYRPWGFRNPQGEFVGLEIDMARDIARTLGVRAEFVPVVASNRMQFLQQGQTDLMIATMSDVADRRRVVGIVHPNYYSSGYNIIMPKTVTPAAWEALRGRTLCAIQGAWYNRPATERFGVEILAFTGVSEVETALEQRRCLGWIYDDNLIAVMLADASGRWKDFHQPLASQSDTPWGLAVRLEDRDRAWGRFVGGMVAEWHRTGKLLEWEKAAGIAESPFLRRMHEALRDHIRTN*