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SCN18_30_10_14_R1_P_scaffold_106_3

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(2017..2292)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK87_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 90.0
  • Bit_score: 161
  • Evalue 3.00e-37
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 90.0
  • Bit_score: 161
  • Evalue 8.50e-38
Integrase catalytic region {ECO:0000313|EMBL:AEA23121.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 90.0
  • Bit_score: 161
  • Evalue 4.20e-37

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 276
GTGGCCCGGTATGTGGAGCTGCGGGAGGCCGGGCGGCCGCCGGTCGCCCGGGAGCACCGGGTCCGGCCGATCGATGAGTACCTGGACAAGATCGAGGAACTGGTCGTGCGCTCGGACGGGCGCGTGCGCGCCGACGTGGTGCACGAGCGGATCTCCGCGATGGGGTTCACCGGTGGTGAGCGCACCACCCGGCGCACGGTCGCGGAGGTCAAGGCGCGGCTGCACGCCGGGCAGCGGCGGGTGTTCCGGCCGTGGGTGCCGGCGCCGGCCACATAA
PROTEIN sequence
Length: 92
VARYVELREAGRPPVAREHRVRPIDEYLDKIEELVVRSDGRVRADVVHERISAMGFTGGERTTRRTVAEVKARLHAGQRRVFRPWVPAPAT*