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SCN18_30_10_14_R1_P_scaffold_106_18

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(18063..18704)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA55 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 173.0
  • Bit_score: 163
  • Evalue 1.80e-37
Predicted protein {ECO:0000313|EMBL:EFL09614.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 205.0
  • Bit_score: 159
  • Evalue 2.90e-36
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 200.0
  • Bit_score: 150
  • Evalue 4.60e-34

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAGCGGGGCGGTCGGAGTGCCGTGGCAGCCGCCGCCGGGGCGGGTCGCGCGGCGCCGCGACCGCAAGGTGCAGGACATCCTCTCCGCGGCTGCCGAGGTGCTCGCCGAGCGCGGCTACCACGGCCTGAGCCTGGATGAGATCGCCGATCGGCTGGACCTGACGAAGGCCTCTCTCTACCACTACTTCCCGAGCAAGGAGGCACTGGTCAGTTCCTGCCTCGAACAGCTGGGCAGCTCGCTCAACGACCAGCTGCGCAGCCTCGTCGAGGCCAACCCGGGCACCGCGACCGAGCAGCTCGGCCTGCTGATCAGGAGCCAGCTGGACCTGGTCGTCCGCACTCGCCCGGAAATGGCCCGGTTGTTCATCCAGCCGCAGGACTGGCCGGAGCCCTACCGCCGACGCACCCGGCGCCTTCGTGAGCAGCACGACGCGATCTTCCGCGCGGTGGTGCGCCGCGGTATCGCCCTCGGTGAGTTCGTCGTGGACGAGGACGTGGCGATGCACAACCTATACGGCGCGATGAACCACGTGCCGGTGTGGTTCCGCGGCCGTCGCAAGAAGGATCTCGATTCCGCCGCCGCCGCGGTCGCGTCCAACCTCCTGCGCCTGTTCCACCCCTCGGCCGGGCCGGGCTGCTGA
PROTEIN sequence
Length: 214
MSGAVGVPWQPPPGRVARRRDRKVQDILSAAAEVLAERGYHGLSLDEIADRLDLTKASLYHYFPSKEALVSSCLEQLGSSLNDQLRSLVEANPGTATEQLGLLIRSQLDLVVRTRPEMARLFIQPQDWPEPYRRRTRRLREQHDAIFRAVVRRGIALGEFVVDEDVAMHNLYGAMNHVPVWFRGRRKKDLDSAAAAVASNLLRLFHPSAGPGC*