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SCN18_30_10_14_R1_P_scaffold_364_5

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4305..4853)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, XRE family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B132_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 4.30e-51
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 1.20e-51
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ACZ83439.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 6.00e-51

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGGCAGCGGAAACGGAAGGGGGTCGGCCGGCGCTCGACTCCGGGACGACGGTCGGGCCGCGCGTCGCGGCGCTGCGGGCCGAGCGGGGCTGGTCGCTGTCGGAGCTCGCGCGCCGGGCGTCGCTGGGCAAGGCGACGCTGTCGGGTCTGGAGGCGGGCACCCGCAACCCGACGCTCGACACCCTGCACGCGGTGGCCGCCGCGCTGGAGCTGCCGCTGACGGCGATCCTCGCGACCCCGCCGACGGAGCTGGTGCGCGGCGCGGCCGTCGAGATGACGCTGCTGCGGGTGTTCGACGACGGCCCGATCACCTACGAGCTGTACCGGATGCGGATCCCGGCCGGGGCGGCGCAGCAGTCGCCCCCGCACCACGCCGGGGTCACCGAGCACGCGACGGTGTTCGCGGGGGTGCTGGAGACGGCGGCCGGGAGCGCCGGGCCGGGCGAGTACGTCGAGTGGGCGGCCGACGTCCCCCACGGCTACGCCGCCGTGGGCGAGACGGACGTGCTGGCGAGCCTGCTCATCCGCTATCCGCGTCCGCCGGCCTGA
PROTEIN sequence
Length: 183
VAAETEGGRPALDSGTTVGPRVAALRAERGWSLSELARRASLGKATLSGLEAGTRNPTLDTLHAVAAALELPLTAILATPPTELVRGAAVEMTLLRVFDDGPITYELYRMRIPAGAAQQSPPHHAGVTEHATVFAGVLETAAGSAGPGEYVEWAADVPHGYAAVGETDVLASLLIRYPRPPA*