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SCN18_30_10_14_R1_P_scaffold_364_9

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(8972..10354)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 472.0
  • Bit_score: 530
  • Evalue 3.50e-148
Choline dehydrogenase {ECO:0000313|EMBL:AEA22505.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AEA22505.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 472.0
  • Bit_score: 530
  • Evalue 1.70e-147
Choline dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM18_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 472.0
  • Bit_score: 530
  • Evalue 1.20e-147

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGGTCGACGTGCTGATCGTGGGCGGTGGCTCCGCGGGCTGCACGCTCGCGGGCCGGCTCACCGACCGGCCGGGTCGCAGCGTGCTGCTCCTGGAGGCCGGGCCGCTCGACTCCCTCCCCGAGCTCCGGGACGCCACCTCGCTCGCCGCCACCGCCCCGCGGCACCCCCGGAACTGGGCCTACGCCGCGGAGCTGCGGCCCGGCAACTCCCACATCGTGCCGCGCGGCAAGGGGCTCGGCGGGTCGGGCGCGATCAACGGCGCCAACTGGACGCGCGTCACCCCCGCCGACGCCGACGGCTGGGGCGTGCCGGGCTGGTCCTACGCCGACCTGCTGCCGCACTACGTCCGCGCCGAGCACGACCACGACTTCGCCGGTCCGCACCACGGCGACCACGGCCCGGTCCCGGTCGTCCGCCCGGCCGGTGACCTGCGCCATCCCGCCGTCGACCGGTTCCTCGAGGCCGCGGCGAAGCTGGGTTTCCCCGACGAGGCGGACAAGAACGCCGGTGGTGCGCCCGGCGCGGGGCTCGTCCCGTCGAACTCGCTGAACGGGGTGCGGGTCGACGCCGCGTCGGCGTACCTGGTGGGCGAGCGGCCCGGCCTGACCGTCCGCGGGCTCGCCCCCGTCGCGCGCGTCCTGCTCGACCACGGCCGGGCCTGCGGGGTGGTGCTGCGCAGCGGCGAGATCATCGAGGCGGGTGAGGTGGTGCTGTGCGCGGGCGCGGTGGCCACGCCGCAGGTGCTGATGGCGTCCGGGATCGGGGACGGGGTGGGCCAGGGCTGGTCCGACCACCCGTCGGTCTACCTCCCGTTCGCCGACGTCGACCCCGGCGCGCACCCGCAGGCGCCCGGCAGCCAGGTGGCGCTCGACCTCGACTGCGGTGCCGATCCCGCCGGCGACGCGGAGGTGCTGCTGTTCGTCCGGCCCTTCGTGCCGGGGGGTGACCTGCACCTGATGTGCGCGCTGCAGGCCCCCGACAGCCGCGGCACCATCGAGCTCGGCGACCCCCGGCCCCGGATCGCCTACGGCTACCTGCGCACCGAGCACGACCGGCGCCGGCTGCGGCACGCCATCCGCACCGCCGCCGAGTTGCTGCGGGCGGGACTGGGCCGGCGCACCGCCCCCGAGGGTGACGTCCTGGGCAACGACCGTGCGCTCGACGGCTGGATCGCCGAGAACCTCACCACGTCCGTCCACATGTGCGGGAGCGCCGCGATCGGCCGGGTCGTCGACGCGGAGCTACGGGTGATCGGGGTGGACGGGTTGCGCGTCGCCGACACGTCCGTGATCCCGACGGTGCCGCGGCGCGGGCCGGCGGCCACGGCCGTCGCGATCGGGGAGAAGGCGGCGGACCTGCTCACCGTCGAGGAACCGGCGTAG
PROTEIN sequence
Length: 461
MVDVLIVGGGSAGCTLAGRLTDRPGRSVLLLEAGPLDSLPELRDATSLAATAPRHPRNWAYAAELRPGNSHIVPRGKGLGGSGAINGANWTRVTPADADGWGVPGWSYADLLPHYVRAEHDHDFAGPHHGDHGPVPVVRPAGDLRHPAVDRFLEAAAKLGFPDEADKNAGGAPGAGLVPSNSLNGVRVDAASAYLVGERPGLTVRGLAPVARVLLDHGRACGVVLRSGEIIEAGEVVLCAGAVATPQVLMASGIGDGVGQGWSDHPSVYLPFADVDPGAHPQAPGSQVALDLDCGADPAGDAEVLLFVRPFVPGGDLHLMCALQAPDSRGTIELGDPRPRIAYGYLRTEHDRRRLRHAIRTAAELLRAGLGRRTAPEGDVLGNDRALDGWIAENLTTSVHMCGSAAIGRVVDAELRVIGVDGLRVADTSVIPTVPRRGPAATAVAIGEKAADLLTVEEPA*