ggKbase home page

SCN18_30_10_14_R1_P_scaffold_621_14

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(8778..10889)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-galactosidase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZB9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 733.0
  • Bit_score: 766
  • Evalue 2.10e-218
Alpha-galactosidase {ECO:0000313|EMBL:EWM18142.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 697.0
  • Bit_score: 786
  • Evalue 2.70e-224
glycoside hydrolase clan GH-D similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 712.0
  • Bit_score: 753
  • Evalue 5.10e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2112
ATGCCAACAAGTTCCAACATCGAGACGGCCGTCCTGCGGGCTGGCGGCACCGCCGTCCTGCTCGATCTGAGCGGCCCGGGACTGCCCCGGATCCTGCACTGGGGGGCCGATGTGGATCTTCCGGACACGTCACTCCCCGCAGTCGTCGCGGCCCTGGAGCCCGGCGTCCCGCCCGGCACCGTCGACGCTCCCTGGCCCCTGACGGTGCTCCCGGGTGCCGCCGACGGCTGGCCCGGCCGCGCCGCGGTCCGTGGACAGGGGCGCGTGCCCTATCCGCGCTGGTCGATCGCCTCCCACGACGTCACGCCGACAACGGTCCGGGTCGCGGCCCGCGACGCCGAGGCGGGCCTGGGGCTGGACCTGGCGCTGGTGCTCGAACCGTCCGGGGTCCTGACGATCGATGTCACGTTGAGTAACCGGGGAAGGGAGGAATATGTACTCGCGGGCCTCACCCCGGTGCTGCCCGTTCCCTCCCGCGCGGGGGAGCTGCTGGACCTCACCGGCCGGTGGTGCCGGGAGCACTCACCGCAGAGGTCACAGGTGCATGTCGGAATCCGTGCGCGGGAGTCCTGGCGGGGCCGACCCGGACACGACGCCACACCGCTGCTCGTGGCGGGCACCCCCGGGTTCGGGTTCGGCCACGGCGAGGTGTGGGGCGTGCACGTCGCGTGCGGCGGCAACTCCGTGCACCTCGTCGAGCGGGTGCCCGAGGGCTTCGCCGTGCTGGGCGGCGGCGAGCTCGTCGAGCCCGGTGAGATCGTGCTCGCCCCGGGCGAGGCCTACACCGCGCCGACGCTGCTCGCGGCCTGGTCCGACGAGGGCCTCGACGGGCTCTCGGCGCGGCTGCACGAGCACGTCCGTGCGCGGCCGGGCCACCCGTCGTCGCCGCGGCCGCTGACGCTCAACGTGTGGGAGGCCGTCTACTTCGACCACGACCTCGCCCGGCTCACCGCGCTCGCCGACCGCGCGGCCGCGCTGGGCGTCGAGCGCTACGTGCTGGACGACGGCTGGTTCCTCGGCCGCCGCGACGACACCAGCGGACTGGGGGACTGGGTCGTCGACCCGGACGTGTGGCCGGACGGTCTGCACCCCCTCGCGGACCACGTGCGGGGCCTCGGCATGCAGTTCGGGCTGTGGTTCGAGCCCGAGATGATCTCGCTGGACTCCGAGGTGGCCCGCGCCCACCCGGACTGGGTGCTCGCCGCCCCCGGCCGGCTCCCGCGCACGGCGCGCCACCAGTACGTCATCGACCTGGCCAACCCCGGCGCCTACGCCCACGTCCTCGGGCAGATCGACACGCTGTGCACCGAGTACGCGCTGGACGCGATCAAGTGGGACCACAACCGCGACCTGTCCGAACCCGTCCACGACGGCCGTCCCGGCGCCCACGTGCAGACCGAGGCGCTGCACCGGCTGTGGGACGAGCTGCGGGCCCGCCACCCCGACCTGGAGATCGAGTCCTGCGCGTCCGGGGGCGGACGCTCGGACCTCGCGACGCTCGCGCGTACCGACCGGATCTGGGCCTCGGACTGCACGGATCCCGTGGAACGCCAGGCCATCCAGCGCTGGACGGGCCTGCTCCTGCCGCCGGAGCTGGTCGGCGGGCACGTCGGCGCGCCGGTCTCCCACACCACCGGTCGCGCCAGCGCCCTGTCGTTCCGGCTGGTCAGCTCGCTGTTCGGACACGCGGGCATCGAGTGGGACATCACCACCTGCTCCGACGACGAGCTGGACCGGCTGCGCGAGTGGGCCGCGCTCTACAAGGAGCTGCGCGGGGTGCTGCACTCCGGCCGGACGGTGCGCGTCGACGATCCCGGGGAGGGGGCACTGCTGCACGGCGTCGTGGGTGCAGACCAGGGGATCTACGCCTACGTGCGGCTCGCGTCCACCGTCGACGTGATCCCGCCACGGCTGCTGCTGCCCGGCCTCGACCCCGCCCGGACCTACCGCGTGCAGGCCCGCGGCGAGGTCCCGTCGTCGGCGCGGGCGCAGACCCCGTGGCTGGAGAAGGGCGTCGAGCTCCCGGGCAGTGTGCTCACCCGGGTGGGGCTCGCGCCGCCGCTGCTGCACCCCGACCACGCGGTGCTGCTGCACGCGGTTGCCGTCCGGTAA
PROTEIN sequence
Length: 704
MPTSSNIETAVLRAGGTAVLLDLSGPGLPRILHWGADVDLPDTSLPAVVAALEPGVPPGTVDAPWPLTVLPGAADGWPGRAAVRGQGRVPYPRWSIASHDVTPTTVRVAARDAEAGLGLDLALVLEPSGVLTIDVTLSNRGREEYVLAGLTPVLPVPSRAGELLDLTGRWCREHSPQRSQVHVGIRARESWRGRPGHDATPLLVAGTPGFGFGHGEVWGVHVACGGNSVHLVERVPEGFAVLGGGELVEPGEIVLAPGEAYTAPTLLAAWSDEGLDGLSARLHEHVRARPGHPSSPRPLTLNVWEAVYFDHDLARLTALADRAAALGVERYVLDDGWFLGRRDDTSGLGDWVVDPDVWPDGLHPLADHVRGLGMQFGLWFEPEMISLDSEVARAHPDWVLAAPGRLPRTARHQYVIDLANPGAYAHVLGQIDTLCTEYALDAIKWDHNRDLSEPVHDGRPGAHVQTEALHRLWDELRARHPDLEIESCASGGGRSDLATLARTDRIWASDCTDPVERQAIQRWTGLLLPPELVGGHVGAPVSHTTGRASALSFRLVSSLFGHAGIEWDITTCSDDELDRLREWAALYKELRGVLHSGRTVRVDDPGEGALLHGVVGADQGIYAYVRLASTVDVIPPRLLLPGLDPARTYRVQARGEVPSSARAQTPWLEKGVELPGSVLTRVGLAPPLLHPDHAVLLHAVAVR*