ggKbase home page

SCN18_30_10_14_R1_P_scaffold_501_16

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 13013..15433

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 791.0
  • Bit_score: 1212
  • Evalue 0.0
DNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPA8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 791.0
  • Bit_score: 1212
  • Evalue 0.0
DNA ligase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 791.0
  • Bit_score: 1212
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2421
GTGCGGGCGCCGGCCGGAGCCCCACCGAGGGGGTCCCGCTCCCGGAAGCGGCTGGTCGCCCGTCCGGGATTGTCGGGGTTCGTCGGTAACCTCGCCCCCGTGAGCCCAGAAACTGCGCAGCAGCGGCACGCCCGGTTGGCCGAGGAGGTCGCGGGGCACCAGTTCCGGTACTACGTGCTCGACGCGCCCGTCCTGTCCGACGGGCAGTTCGACGAGCTGTGGCGCGAGCTGCTGGCGCTGGAGGACGAGCACCCGGAGCTGGTCACGCCGGAGTCGCCCACGCAGAAGGTCGGCAGCCGGTTCAACACCGACTTCGTGGCCCACGACCATCTCGAGCGCATGCTCAGCCTCGACAACGCCTTCTCCGACGACGACCTGCGCGGCTGGGCGGAGCGGGTGGCGAAGGACGTGGGAACGGAGGAGGTCCACTACCTCTGCGAGCTCAAGATCGACGGGCTGGCCGTCAACCTGCTCTACGAGAACGGCAAGCTCACCCGCGCGCTCACCCGCGGCGACGGGCGCACCGGCGAGGACATCACGCTCAACATGCGCACGCTCGAGGAGGTCCCGGTCCAGCTCACCGGCACCGACGAGTTCCCGGTGCCGGAGCTGGTGGAGGTGCGCGGCGAGGTCTACTTCCGGCTGGAGGACTTCCAGGCGCTCAACGCGCTCATGGTGGAGGCCGGCAAGCCCGTCTACGCCAACCCGCGCAACACCGCGGCCGGGTCGCTTCGGCAGAAGGACCCGCGCGTCACCGCGTCCCGGCGCCTGCGGCTGATCTGCCACGGCTTCGGCAAGCGCACGGGGTTCGCGCTGGAGCACCAGTCCCAGGGCTACGACGCGCTGCGGGCCTGGGGCCTGCCGGTCTCGGAGCGCACGGTGGTCCTCACCGGCGTCGACGAGGTCATCGAGCACACGCGGTACTGGGGCGAGCACCGCCACGACATCGAGCACGAGATCGACGGCGTCGTCGTCAAGGTCGACGAGGTGGCGCTGCAGCGGCGACTGGGCTCCACCTCGCGCGCACCCCGGTGGGCCATCGCGTTCAAGTACCCGCCCGAGGAGGTCACCACCCGGCTGCTCGACATCCGCGTCAACGTCGGGCGCACCGGGCGCGTCACGCCGTTCGCGATGATGGAGCCGGTGGTGGTCGCGGGGTCCACGGTCGAGATGGCCACGCTGCACAACGCCGACGAGGTGCGCCGCAAGGGCGTGCTCATCGGCGACCACGTCGTCATCCGCAAGGCCGGCGACGTCATCCCGGAGGTGCTCGGCCCGGTCATCGACCTGCGCGACGGCTCCGAGCGCGCGTTCGTGATGCCCACCCACTGCCCGGAATGCGGCACCGCCCTCGTGCGGCAGAAGGCCGGCGACATCGACCAGCGCTGCCCCAACGCCCGCTCCTGCCCCGCGCAGCTGCGGGAGCGGCTGTTCCACGTGGCCGGCCGCGGCTCGTTCGACATCGAGGGCCTCGGCTACGAGGCCGCCACCGCGCTGCTGACCTCGGGGGTGGTCCAGGACGAGGGCGACGTCTTCGCGCTCGACGAAGCCGATCTGCTGCAGGTCGAGCTGTTCCGCAAGAAGGACGGGGGATTGTCGGCCAACGGCGCCAAGCTGCTCGCCAACCTGGAGGCGGCGAAGGAGCGGCCGCTGTGGCGGGTGCTGGTCGGGCTCTCGATCCGCCACGTCGGTCCCACCGCGGCCCAGGCGCTGGCGCGGGAGTTCACGTCGATGGACGCCATCGAGGCGGCCGCGGCGCAGGCGGCCCACGACACGGAGGCCGCGGGCGTCGCGATCACCTCCGACGGCAGCGCGGCCGAGGACGCGGGCGAGGACACGGGCGAGGACATGGGCGAGGACACGGCCGGGGACGAGCCCGAGTCGGTCGTACCCGTGGATCCCGAGGCCGAGCCGGAGGAGCGCTCCGCCGAGGAACGCGCCCTCGCCGCGGAAAAGGCGGCCAGGGCCGCCACCCGCGCACAGGCCAGGGCCCTGGCCGCGGCACTGGCTCCCATCGCCGGCGTGGAGGGGGTGGGTCCCACCATCGCCGCCGCGGTGCGCGACTGGTTCTCCGTCGACTGGCACCGCGAGGTCGTCGCGAAGTGGCGCGCCGCGGGCGTGCGCATGGTCGACGAGGTCGACGAGTCCGTGCCCCGCACGCTCGACGGCCTGTCCATCGTGGTCACCGGCTCGATGGACGGGTACTCGCGCGACGAGGCCAAGGAGGCCATCACCGCACGGGGCGGCCGGGCCGCGGGGTCGGTGTCGAAGAAGACCTCGTTCGTGGTCGCCGGCGAGGCTCCCGGGACCAAGTACGAGAAGGCGCTCGAGATCGGGGTCCCGATCCTCGACGAGGCCGGCTTCCGGGTGCTGCTCGACCGCGGTCCGGACGCGGCGCGCGAGGTGGCCACCACGGGCTGA
PROTEIN sequence
Length: 807
VRAPAGAPPRGSRSRKRLVARPGLSGFVGNLAPVSPETAQQRHARLAEEVAGHQFRYYVLDAPVLSDGQFDELWRELLALEDEHPELVTPESPTQKVGSRFNTDFVAHDHLERMLSLDNAFSDDDLRGWAERVAKDVGTEEVHYLCELKIDGLAVNLLYENGKLTRALTRGDGRTGEDITLNMRTLEEVPVQLTGTDEFPVPELVEVRGEVYFRLEDFQALNALMVEAGKPVYANPRNTAAGSLRQKDPRVTASRRLRLICHGFGKRTGFALEHQSQGYDALRAWGLPVSERTVVLTGVDEVIEHTRYWGEHRHDIEHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAFKYPPEEVTTRLLDIRVNVGRTGRVTPFAMMEPVVVAGSTVEMATLHNADEVRRKGVLIGDHVVIRKAGDVIPEVLGPVIDLRDGSERAFVMPTHCPECGTALVRQKAGDIDQRCPNARSCPAQLRERLFHVAGRGSFDIEGLGYEAATALLTSGVVQDEGDVFALDEADLLQVELFRKKDGGLSANGAKLLANLEAAKERPLWRVLVGLSIRHVGPTAAQALAREFTSMDAIEAAAAQAAHDTEAAGVAITSDGSAAEDAGEDTGEDMGEDTAGDEPESVVPVDPEAEPEERSAEERALAAEKAARAATRAQARALAAALAPIAGVEGVGPTIAAAVRDWFSVDWHREVVAKWRAAGVRMVDEVDESVPRTLDGLSIVVTGSMDGYSRDEAKEAITARGGRAAGSVSKKTSFVVAGEAPGTKYEKALEIGVPILDEAGFRVLLDRGPDAAREVATTG*