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SCN18_30_10_14_R1_P_scaffold_501_21

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(20593..21771)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LysR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPB2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 382.0
  • Bit_score: 465
  • Evalue 4.20e-128
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 382.0
  • Bit_score: 465
  • Evalue 1.20e-128
Regulatory protein LysR {ECO:0000313|EMBL:AEA24027.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 382.0
  • Bit_score: 465
  • Evalue 5.90e-128

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
GTGACGGGCGGGCTGGACCGGCCCTGGGCCCGGGTGCCGGCCTGGGTCGGGGCCGCGCTGCGACCCGAGCTCGCCGGCTCGGCGGACGACATCATCACGGCGGTGCGCACCGACGTCACCGACTACGCACGGCCGCTCGTGGGGCGCTTCGGCTCACGGCTCACCGAGGGCGTCTCGGTGGCGCTGGGCCAGTTCCTCGACCTGCTCGGCTGCGACGTGCCGCTCGAGGACGTCCGCGTCTACCGCGCGCTGGGCCAGCTCGAGCACCGCGAGGGCCGGACGCTCGCGGCCCTGCAGTCGGCCTACCAGGTCGGCAGCCGCACGCTGTGGCGCCGGCTCGGGGAGAGCACCACCGCCCGGCAGCTGCCACCGGACGTCATCTTCCGGCTGGCGGAGGCCCTGTTCACCTACATCGAGGAGCTGTCGGCGGCATCGGTGGCGGGATGGGCCGCCGAGGAGTCCAGCCGGGCGGGCTCGCTGCAGACCCGGCGTCACGCGCTCGTCGAGCTGCTGGCCCGGCCGACCCCGGCCCCTCCGGCCGAGATGGAGCGGCTGGCCGCGGCGGCCGGCTGGCGGCCGCCCGCCCGGCTGGCGGCGCTCGTCGTCGAGGACGCGGTGGAGGTGGCCACCCGGCTCCCGTCCGCGATCGGCGCGGACCTCGACCCGGTCGGTGTCGCACTCGTCGCCGTGCCGGAACGGGACGGCTGGGTCGACCAGGTCCGCGCCGGGCTGCGGGGCCGGCCGGGGGTGCTGGGCCCCGTGGTGGAGCCCGCCCGGGCACCCCGGTCGATCGCCCGGGCGCAGGCCGCCTGGCCGCTGCACGTGGGCGGGATGCTCCCCACCGACACGGACGACCCCCTCGTGCGCGCCGACGAGCACCTGCTGGCCCTGCTGCTGGCTGCGCAGCCCGATCTCGCCGCCGACCTCTGCGAGCGGGCCCGGCACCCGCTCGCCGACCTCCCCGACGGTGCCGCCGCCCGGGCCGAGGAGACGCTGCGGGCCTGGCTCGACGCCCACGGCGACGTGACGGCCACCGCCGCGACCCTGCACGTGCATCCGCAGACCGTGCGCTACCGCCTCGCCGGGCTGCGCGAGACGTTCGGCGGGGCGCTCGACGACCCGCTCCGTCGACTGGAGCTGGCCATCGCGCTCCGCACGACCGACCCCGACCAGCACTGA
PROTEIN sequence
Length: 393
VTGGLDRPWARVPAWVGAALRPELAGSADDIITAVRTDVTDYARPLVGRFGSRLTEGVSVALGQFLDLLGCDVPLEDVRVYRALGQLEHREGRTLAALQSAYQVGSRTLWRRLGESTTARQLPPDVIFRLAEALFTYIEELSAASVAGWAAEESSRAGSLQTRRHALVELLARPTPAPPAEMERLAAAAGWRPPARLAALVVEDAVEVATRLPSAIGADLDPVGVALVAVPERDGWVDQVRAGLRGRPGVLGPVVEPARAPRSIARAQAAWPLHVGGMLPTDTDDPLVRADEHLLALLLAAQPDLAADLCERARHPLADLPDGAAARAEETLRAWLDAHGDVTATAATLHVHPQTVRYRLAGLRETFGGALDDPLRRLELAIALRTTDPDQH*