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SCN18_30_10_14_R1_P_scaffold_739_14

Organism: SCN18_30_10_14_R1_P_Pseudonocardia_73_26

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(18345..20228)

Top 3 Functional Annotations

Value Algorithm Source
Selenocysteine-specific translation elongation factor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU51_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 580.0
  • Bit_score: 615
  • Evalue 5.20e-173
selenocysteine-specific translation elongation factor similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 580.0
  • Bit_score: 615
  • Evalue 1.50e-173
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AEA23770.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 580.0
  • Bit_score: 615
  • Evalue 7.30e-173

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
GTGCACGTAGTCGCTACCGCCGGCCATGTCGACCACGGCAAGTCGACGCTGGTCCGGGCCCTGACCGGGATGGAGCCCGACCGCTTCGCCGAGGAGAAGCGGCGGGGGATGACCATCGACCTCGGGTTCGCCTGGACCACCCTTCCCTCGGGGCCCATCGTCGCGTTCGTCGACGTACCCGGCCACGAACGGTTCGTCACCACCATGCTCGCCGGCGTGGGCCCGGTGCCCGCGGTGCTGCTCGTCGTGTCCGCCGACGAGGGCTGGATGCCGCAGTCCGCCGAGCACGTCGACGCGCTGGTGGCGCTCGGCGTCGACCGTGGGCTGCTGGTGGTCACCCGCAGCGACCTGATGGAGCCCGAGCTGGCCCGCGACGAGGCCCGCGAGCATCTGGCCGACACCCCGCTGGCCGGCATGCCCACCGTCTGCGTGTCCGCGCGCACCGGCGCGGGCATGGACGAGCTGCGTACGGCACTCGGGGAGCTCGTCGGCGGCATGCCCGAGCCGGATCCCGCCGCCGACGTCCGGTTCTGGGTGGACCGCGCGTTCAGCGTCCGCGGGGCCGGGACAGTCGTCACCGGCACGTTGGGCACGGGCCGGATCCGCGCGGACGACGAGCTGGAGCTTCTCACGGCGGACGGGACGCGGCGGGTGGGCGTCCGCGGGCTGCAGACGCTCGGGGCCCCGGTCGGTGAGGTGCGGGGAGTGTCCCGGGTGGCGCTGAACCTGCGTGGCCTGCCGCTCGAGGCGGTGGCCCGCGGCGACGTCCTGCTCACCCCGGGCGCCTGGCTGGGCACCGACGTGGTCGACGTGCGGCTGCACGGCGTCCGTGCCGGTGGGACCCCCGCCGTGGCGTCGCTGCCGTCGGAGCTGAGCCTGCACGTCGGCTCGGTGGCGGTGCCCGCCCGGCTCCGGCCGCTGGGCGCGGACACGGTGCGGTTACGGCTGCGGCGGCCGGTGCCGCTGCGGATCGGGGACCGTGCGGTGCTGCGCGACCCCGGGCGGCGCCGGGTCACCGCCGGGCTGACGGTCCTCGATGTCCGGCCGCCGCCGCTGCGTCGCCGCGGCTCGGCGGCCCGGCGGGGGGTGGAGCTGGCCGGTATGACGGGCCGGTCGTCGGCGGCGGAGGAGCTGGCCCGCCGCGGTCTGGCCCGCGGCGCCGACCTGCGCGCGATGGGTGTGTCGATCGCCGGGCTCGACGTGCCGGCGGCGGCCGGGTGGCTGCTCGACCCCGACCGGGCGAGCCGGGCCGCCGCGGCGCTCGTCACCGCCGTGGCCGCGCACGACGCCGCCGACCCCCTCGACCCCGGCCTGTCGACGGAGGCCGCGCGCCGGGCCGCCGACCTGCCCGAGTCGAAGCTGCTCGATGCCGTGCTGCGCCACGCCCAGAAGAGCCATGCCCAGAAGAGCCATGCCCAGAAGAGCCATGCCCAGAAGAGCCATGCCGAGAAGGGCCACGCCGAGAAGGGCCACGCCGATCCGACCGGGCTGGTCCTGCGCAACGGCCGGGTGGTGCGTTCGGCGGCCGCCGGCCTGCCCGCGCGCGTACGCGAGGCCCTCGACGCGCTCCGCCACGACCTGGAGCGCGCCCCGTTCGCGGCACCCGAGGCCGACCGGCTGGCCGAGCTCGGGCTCGGGCCGCGGGAGCTCGCCACCCTCGTCCGGGCCGGTGAGCTGCTGCGGGTCGCCGACGGGGTGGTCCTGCTGCCGACGGCCGACGCCCGGGCCGTCGAGGTGCTCGCGGGTCTCGACGAGGAGTTCACCCTGAGCGCCGCGCGCCAGGCCCTCGGCACGTCCCGGCGCGTGGCGGTGCCCCTGCTGGAGCTGCTGGCCCGGACCGGCCGCACCCGCCGCACCCCCGACGGCGGGCACCGGCTCGTCTAG
PROTEIN sequence
Length: 628
VHVVATAGHVDHGKSTLVRALTGMEPDRFAEEKRRGMTIDLGFAWTTLPSGPIVAFVDVPGHERFVTTMLAGVGPVPAVLLVVSADEGWMPQSAEHVDALVALGVDRGLLVVTRSDLMEPELARDEAREHLADTPLAGMPTVCVSARTGAGMDELRTALGELVGGMPEPDPAADVRFWVDRAFSVRGAGTVVTGTLGTGRIRADDELELLTADGTRRVGVRGLQTLGAPVGEVRGVSRVALNLRGLPLEAVARGDVLLTPGAWLGTDVVDVRLHGVRAGGTPAVASLPSELSLHVGSVAVPARLRPLGADTVRLRLRRPVPLRIGDRAVLRDPGRRRVTAGLTVLDVRPPPLRRRGSAARRGVELAGMTGRSSAAEELARRGLARGADLRAMGVSIAGLDVPAAAGWLLDPDRASRAAAALVTAVAAHDAADPLDPGLSTEAARRAADLPESKLLDAVLRHAQKSHAQKSHAQKSHAQKSHAEKGHAEKGHADPTGLVLRNGRVVRSAAAGLPARVREALDALRHDLERAPFAAPEADRLAELGLGPRELATLVRAGELLRVADGVVLLPTADARAVEVLAGLDEEFTLSAARQALGTSRRVAVPLLELLARTGRTRRTPDGGHRLV*