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SCN18_31_3_15_R4_B_scaffold_1639_1

Organism: SCN18_31_3_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_12

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..1037)

Top 3 Functional Annotations

Value Algorithm Source
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 344.0
  • Bit_score: 399
  • Evalue 4.50e-108
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=AROA_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 344.0
  • Bit_score: 399
  • Evalue 3.20e-108
3-phosphoshikimate 1-carboxyvinyltransferase similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 344.0
  • Bit_score: 399
  • Evalue 9.20e-109

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCCTAGCACCTCCACATCGCGCGCCGTTGCCGCCAGGCCCGCGCCGCCGCTCAGCGGGGAAGCCCCGGTTCCGGGCGATAAATCCATCTCGCACCGGGCCTTGCTGCTCGGCACGCTGGCCGTCGGCGAAACGCGGATTTCCGGCCTTCTGGAGGCGGAAGACGTGCTCAATACCGCATCCGCCATGCGGGCCTATGGTGCCACGGTGGAACGGCAGGGCCCCGGCCTCTGGTCCGTCCACGGCGTGGGGGTGGGCGGGCTTTCTGCGCCCGCAGCACCGCTTGATTTCGGCAATTCGGGCACCGGCTCGCGTCTGGTGATGGGGATGGCGGCGACAACCCCGGTCACCAGCGTCTTCACCGGCGATTCCTCGCTGCGCCGGCGGCCGATGAAGCGCGTGCTCGACCCGTTGACCCGCTTCGGCGCCCGCTACGAGGCCCAGCCGGGCGGATTGATGCCGCTGTCGCTGACCGGCGCTGGCCCCGCGCTCGCCATCGATTATGAGGTTACGGTCGCCTCCGCCCAGGTGAAATCGGCGCTGCTATTCGCCGCGCTCAATGCCACCGGCCGCAGCCGCATCGGCCAGCGCGCGCTGACCCGCGATCACACCGAAAAAATGCTGGCCGCTTTTGGCGCCGATATTTCGGTGGAGCCGCGCTCGGGTGGCGGCGAGGTGATTTCCCTGATGGGGGAGGCTGAACTTTCGCCCTGCGCGGTCGATGTGCCGCGCGATCCATCTTCGGCGGCGTTTCCGCTGGTGGCGGGTCTTCTGGTGCCCGGCTCGGTGGTGTCGGCACCGGGTGTACTGCTCAATACCCGCCGTACCGGGCTGTTCGAGGCCTTGCGCGCGATGGGGGCTGAAATCACGGTTTCCAATCTGCGCCAGAGCGGCGGCGAAGACATTGGCGATATCGCGGTTCGCTTTTCGGCGTTGAAGGGGATCGAGGTGCCGCCGGAAGGCGCGCCAGCGATGATCGACGAATATCCGGTCCTGGCTGTTGCCGCCGCTTTTGCCGAAGGCCGCACCGTGATG
PROTEIN sequence
Length: 345
MPSTSTSRAVAARPAPPLSGEAPVPGDKSISHRALLLGTLAVGETRISGLLEAEDVLNTASAMRAYGATVERQGPGLWSVHGVGVGGLSAPAAPLDFGNSGTGSRLVMGMAATTPVTSVFTGDSSLRRRPMKRVLDPLTRFGARYEAQPGGLMPLSLTGAGPALAIDYEVTVASAQVKSALLFAALNATGRSRIGQRALTRDHTEKMLAAFGADISVEPRSGGGEVISLMGEAELSPCAVDVPRDPSSAAFPLVAGLLVPGSVVSAPGVLLNTRRTGLFEALRAMGAEITVSNLRQSGGEDIGDIAVRFSALKGIEVPPEGAPAMIDEYPVLAVAAAFAEGRTVM