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SCN18_31_3_15_R4_B_scaffold_159_14

Organism: SCN18_31_3_15_R4_B_SCNpilot_BF_INOC_Flavobacterium_39_30_40_63

near complete RP 50 / 55 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 16678..18423

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein Rhs n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034B065F similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 581.0
  • Bit_score: 804
  • Evalue 5.60e-230
Type IV secretion protein Rhs {ECO:0000313|EMBL:KFF10892.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 581.0
  • Bit_score: 1008
  • Evalue 2.80e-291
Rhs element Vgr protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 581.0
  • Bit_score: 798
  • Evalue 6.70e-229

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Taxonomy

SCNpilot_BF_INOC_Flavobacterium_39_30 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1746
ATGAATAATAGCGGCTACATACAAACAGCAAAAACTCCCGACCTGGTAACCTATAAAGTGATGTCCGGAGGCACAGAACTGCCCGTTCAATACGGCGTAAAAAGTATTGTGGTAGAAAAAGAAGTGAACAGGATTCCACATGCCCGCATTGTTATTTTAGATGGAAGTGCTCCGGATCAGAACTTTAAACTAAGTAGTGAAAATTTACTGATTCCGGGAAAGGAAATTGAAATTACGGTTGGATACCATTCCAAAGAAGACACCCTTTTTAAAGGAGTTGTGGTAAAACATAACTTAAAAGTTAAAAACGGATCGACTTACCTGATTGTGGAGTGTAAAGACAAAGCCGTCAAGATGACTTTGGGAAGAAAAAGCAAGTATTTCTACGAAAGTAAGGACAGCGATATTATCGAAGAGCTGATCGGAAATAGTGGTGCTACTGCCGATGTTGAAGCTACAGCAAAATCACATAAGGAATTGGTGCAATACCGTGCGTCCGATTGGGATTTTATGGTAACCCGGGCACAGGCCAATGGGAAACTTTGTTTTGTAGACGACGGCACCATCAAAGTAGCCAAACCGAAAGTGAGTGGCGAAACGGTAGAAACCGTAGCCTTTGGTTCTTCTGTTCATGAATTTGACGGAGAAATCGACGCCAGAAATCAGTTTAGTAAAATCACGGCTACTTCGTGGAGTTATACCGATCAGGAAATCGTAGAAGCAGAAGCGCAGGATCCTGCAATTGCACTCAATGGTGACCTTTCGCCAGGTGATCTGGCTGCTGTTTTCGGAATTGAAGACCTGCAGTTGCGACACGGAGGTAAGATAACCCAGGAAGAACTACAGGACTGGGGCGATGCCAAAGCCGTTTTTCAGCAATTAGCGAAAACACGCGGAACAGTAAAGTTTCAGGGGATTTCAAAAGTAAAACCAGGCGTTTTATTAAAATTAGAAGGCTTAGGAAACCGATTTAACGGTACCATTTATGTCACAGGCGTGCGCCATGAAGTTGCAGAAGGAAACTGGTTGGTGACCGCACAATTTGGATTAACACCAACGTGGTTCTCAGAAACCTATGAAGTGAGCGAAATGCCGGGATCCGGAATCATGCCGGCCATTAGCGGTTTGCATGTTGGAGTGGTATCACAATTGGAATCGGATCCGGATGGAGAAGATCGAATCCTGGTACAAATACCAATTATTAACAATGAAGAAGAAGGAATCTGGTGTCGTGTAGCAACACTTGATGCCGGAGAAAACAGAGGCTCTTTTTTCAGACCGGAAATTGGTGATGAGGTTATTATTGGTTTCATAAACGACGATCCAAACGATGCCGTAGTCCTGGGAATGTTGCACAGCAGTGCCAAACCGGCACCGATAACAGCCACCGATGACAATCATGAAAAAGGATTCGTGACCCGAAGTGAAATGAAAATGATTTTCAATGATGATAAAATTTCCTACACACTTGAAACACCGGCTGGTAAGAAAGTGATTTTAGACGAAGATGCCGATATTATAAAGATTGAAGATGAACATTCGAACATACTCACCTTTAAGAGTGATGGTATTACGATGGAAAGTGCGGGAGATATTAAAATTAAAGCCTCCGGAGATGTCAGCATCGAAGGAACCAATGTAAAACTGAAAGCCAGCGCACAGTTTAAAGCTGAAGGAAGTTCCGGTTCGGAAGTGTCCTCAGGAGCAGTAACCGTAGTTAAAGGCTCTCAGGTAAAAATCAACTAA
PROTEIN sequence
Length: 582
MNNSGYIQTAKTPDLVTYKVMSGGTELPVQYGVKSIVVEKEVNRIPHARIVILDGSAPDQNFKLSSENLLIPGKEIEITVGYHSKEDTLFKGVVVKHNLKVKNGSTYLIVECKDKAVKMTLGRKSKYFYESKDSDIIEELIGNSGATADVEATAKSHKELVQYRASDWDFMVTRAQANGKLCFVDDGTIKVAKPKVSGETVETVAFGSSVHEFDGEIDARNQFSKITATSWSYTDQEIVEAEAQDPAIALNGDLSPGDLAAVFGIEDLQLRHGGKITQEELQDWGDAKAVFQQLAKTRGTVKFQGISKVKPGVLLKLEGLGNRFNGTIYVTGVRHEVAEGNWLVTAQFGLTPTWFSETYEVSEMPGSGIMPAISGLHVGVVSQLESDPDGEDRILVQIPIINNEEEGIWCRVATLDAGENRGSFFRPEIGDEVIIGFINDDPNDAVVLGMLHSSAKPAPITATDDNHEKGFVTRSEMKMIFNDDKISYTLETPAGKKVILDEDADIIKIEDEHSNILTFKSDGITMESAGDIKIKASGDVSIEGTNVKLKASAQFKAEGSSGSEVSSGAVTVVKGSQVKIN*