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SCN18_31_3_15_R4_B_scaffold_159_15

Organism: SCN18_31_3_15_R4_B_SCNpilot_BF_INOC_Flavobacterium_39_30_40_63

near complete RP 50 / 55 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 18508..18798

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein {ECO:0000313|EMBL:KFF10891.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 3.50e-42
PAAR repeat-containing protein id=2667420 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 95.0
  • Bit_score: 174
  • Evalue 4.70e-41
PAAR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 94.0
  • Bit_score: 160
  • Evalue 1.50e-37

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Taxonomy

SCNpilot_BF_INOC_Flavobacterium_39_30 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 291
ATGAAACCAGCAGCACGAATTACAGATATGCATACCTGCCCGATGGTTACCGGAAATGTACCTCATGTAGGCGGACCTATATTGCCGGCCGGCGAACCGACAGTATTAATTGGCGGAATGCCCGCAGCAAGAGTAGGCGACAAAGCAATCTGTACCGGTCCACCCGATACGATAGCCGCCGGATCATCGACCGTTTTAATAGGCGGAAAACCGGCAGCAAGACAAGGCGATACCACAGCACATGGAGGTGTCATATCGGCTGGTCTGCCCACCGTGTTAATTGGTGGATAA
PROTEIN sequence
Length: 97
MKPAARITDMHTCPMVTGNVPHVGGPILPAGEPTVLIGGMPAARVGDKAICTGPPDTIAAGSSTVLIGGKPAARQGDTTAHGGVISAGLPTVLIGG*