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SCN18_31_3_15_R4_B_scaffold_528_7

Organism: SCN18_31_3_15_R4_B_SCNpilot_BF_INOC_Flavobacterium_39_30_40_63

near complete RP 50 / 55 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(4699..5259)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4T1_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 186.0
  • Bit_score: 195
  • Evalue 2.90e-47
TetR family transcriptional regulator {ECO:0000313|EMBL:KGO91386.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 216
  • Evalue 2.90e-53
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 186.0
  • Bit_score: 195
  • Evalue 8.30e-48

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGATAAACAAAAAGAAATACTTGCCGCTGCACTGAAACTATTCGTAGAATATGGTTTTCACGGTACCGCTACCAGCAAAATTGCTAAGGAAGCCGGTGTTGCGAACGGTACCTTGTTTCATTATTACAAGACAAAAGAAGACCTGATCATTGCGCTTTATATTGATATCAAATTAAAAGTTGCGGAACATATTGAAAATGCTGTTGCATCCAATACCGATTATAAAACGCATTTTAAAAGCCAGTTTATTGCGATCATGCTGTGGTCACTGGACAACGATTACCAGTTTCGCTACATTCAGCAGTTCTATTCTTCACCCTATGCGTCACAGATAGATTATGAAGAAATACAGAAACTTTCTAAAAAAGGCTGCGAGGAACTGGAAGCTGCTATCCGCAAAAATGTGATTAAAGATCTACCGGTAGATTACCTGATTACGATTGTCAACAATTTTATATTCGGTGTGCAGCAATACCTTCGTCAGTCGAAACTGAGCTTTGAAGCAAAGAAAGAAGTGATTTATAATTCCTTTGATATCTTGTGGACCATGATTAGCTGA
PROTEIN sequence
Length: 187
MDKQKEILAAALKLFVEYGFHGTATSKIAKEAGVANGTLFHYYKTKEDLIIALYIDIKLKVAEHIENAVASNTDYKTHFKSQFIAIMLWSLDNDYQFRYIQQFYSSPYASQIDYEEIQKLSKKGCEELEAAIRKNVIKDLPVDYLITIVNNFIFGVQQYLRQSKLSFEAKKEVIYNSFDILWTMIS*