ggKbase home page

SCN18_31_3_15_R4_B_scaffold_528_26

Organism: SCN18_31_3_15_R4_B_SCNpilot_BF_INOC_Flavobacterium_39_30_40_63

near complete RP 50 / 55 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(24826..26052)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCT7_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 409.0
  • Bit_score: 637
  • Evalue 4.90e-180
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 409.0
  • Bit_score: 637
  • Evalue 1.40e-180
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ06975.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 409.0
  • Bit_score: 637
  • Evalue 6.90e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1227
ATGAACGATCAGACACCAACAATACCCTTTACCGGCTATCAGAAATTTGTAGTTTTCTTATTAGCCATCACCCAATTTACCGTTGTACTGGATTTTATGGTAATGTCGCCTTTGGGAGATATTATGATGAAAACATTGAGCATCAGCCCTTCCCAATTTGGTGTGGCGGTATCTGCCTATGCCTTTAGCGCCGGGATTTCCGGACTTCTTACAGCAGGTTTTGCCGACCGGTTTGACCGTAAAAAACTCCTGTTATTTTTCTATATCGGTTTTGCAACAGGAACCCTGTTTTGCGCATTAGCACCAACGTTCCCGCTGCTGGTAATTGCCCGGATTGTCACCGGAATATTCGGTGGGGTAATCGGTTCTATCTCTATGGCAATAGTAGCCGACCTGTTCAGCCTGCAACAGCGCGGGAAAGTAATGGGTTTTGTTCAAATGGGCTTTGGCGCAAGCCAGGTTTTGGGTATCCCGATCGGTTTATATATCGCCAATAAATGGGGCTGGCATATTCCGTTTTTATGGATAGCCGTAATGGCGGGTATTATTGCGCTTACCCTTTTCCTGAAACTAAAACCCATCAACGAACACCTTTCATTGCAAAGAGATAAAACGGCTTTCCAGCATTTGCTGCATACAATAGCTAAAAAAAATTATAGAATCGGTTTTCTGTCAACAGCCCTCCTATCCATTGGCGGCTTTATGATGATGCCTTTTGGCAGCGCATTTGCCATTAACAATTTAAAAGTAACAGAAGAACAATTACCGCTTATTTTCCTGGTTTCCGGTATTGCTACGCTAATTTCAATGCCTTTTATCGGAAAATGGAGTGATAAAATCAGTAAATTCAAATTATTTGCTGCGGCCACTAGCTGTGCCATCATAATCATTAATATTTATGCCCATTTTTCGGCAACACCATTTTGGCTGGTTCTGACAATGAATGTATTGATGATGGTGGCAATAATGAGCCGGATGGTACCGTCCATTGCGCTCACCTCGGCCATTCCACAGGCACAGGACAGAGGGGCTTTTATGAGCATCAATGCGTCATTACAGCAAATGGCAGGTGGTTTCGGAGCCATGCTCGCAGGAGTTATTATTGTACAAAAAGACAATTTTACCCCTTTACAGCATTATGATACACTAGCCATGATAGCCTCTACCATTATGCTATTCACCATTTATATGGTATACAGGGTAAACAAATTAGTTTTAAAAAAGTAA
PROTEIN sequence
Length: 409
MNDQTPTIPFTGYQKFVVFLLAITQFTVVLDFMVMSPLGDIMMKTLSISPSQFGVAVSAYAFSAGISGLLTAGFADRFDRKKLLLFFYIGFATGTLFCALAPTFPLLVIARIVTGIFGGVIGSISMAIVADLFSLQQRGKVMGFVQMGFGASQVLGIPIGLYIANKWGWHIPFLWIAVMAGIIALTLFLKLKPINEHLSLQRDKTAFQHLLHTIAKKNYRIGFLSTALLSIGGFMMMPFGSAFAINNLKVTEEQLPLIFLVSGIATLISMPFIGKWSDKISKFKLFAAATSCAIIIINIYAHFSATPFWLVLTMNVLMMVAIMSRMVPSIALTSAIPQAQDRGAFMSINASLQQMAGGFGAMLAGVIIVQKDNFTPLQHYDTLAMIASTIMLFTIYMVYRVNKLVLKK*