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SCN18_14_9_16_R3_B_scaffold_4_149

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(167751..168623)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 290.0
  • Bit_score: 454
  • Evalue 4.20e-125
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:GAO41537.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 290.0
  • Bit_score: 458
  • Evalue 4.10e-126
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 290.0
  • Bit_score: 454
  • Evalue 1.20e-125

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGTATGCGTCAACTCAAGATCTCCAAATCTATTACCAACCGCGAAAGCCAAAGCCTTGAAAAATACTTGCAGGAAATTGGCAAGGTAGATCTGATTAGTCCTGAAGAAGAAGTACAATTGGCCCTGAAAATAAAAAATGGGGATCAACGTGCACTGGATCGCCTTGTGAAAGCCAATTTACGCTTTGTTGTTTCTGTGGCAAAACAATACCAAAACCAGGGGCTCACCCTGTCGGATCTTATTAATGAAGGTAATTTGGGATTGATAAAAGCAGCGCTGCGGTTTGATGAAACGAGAGGATTTAAATTTATTTCTTATGCTGTGTGGTGGATACGTCAATCCATTTTACAGGCTTTGGCAGAACAGAGCAGAATTGTACGCTTGCCCTTAAATAAGGTTGGGCTTACAAACCGCATCAGCAAAGCATTTCAGCAATTAGAACAGGAGTTTGAAAGAGAACCTTCTCCGGAAGAATTGGCCTCTGTTTTAGAAATGGATATTGACGAAATTACAGCTACATTAAATGTAAATACCCGCCATGTAAGCATGGATACTCCTTTGGGTGAAGGAGAAGATAATACCCTGATGGATGTAATGATTAATGACAATGCAGAGAAGGCAGATGAACGCCTGGAGCACCACGAATCCTTAAAAAAAGAAATTGAAAGAAGTATGTTGGCCTTAACAGACAGGCAGAAGGCTGTGCTCTGTTATTTTTTTGGGATTGGAACAAATGAGTCGCTCAGTCTTGAAGATATTGGCGCCCGGTTTAACCTCACCAGGGAAAGGGTAAGGCAAATAAAAGACAAAGCCATTACCAAACTTCGTTCCACCAGCCGCTGCAAGCAACTGAGGGTATATCTTGGTTAA
PROTEIN sequence
Length: 291
MSMRQLKISKSITNRESQSLEKYLQEIGKVDLISPEEEVQLALKIKNGDQRALDRLVKANLRFVVSVAKQYQNQGLTLSDLINEGNLGLIKAALRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKVGLTNRISKAFQQLEQEFEREPSPEELASVLEMDIDEITATLNVNTRHVSMDTPLGEGEDNTLMDVMINDNAEKADERLEHHESLKKEIERSMLALTDRQKAVLCYFFGIGTNESLSLEDIGARFNLTRERVRQIKDKAITKLRSTSRCKQLRVYLG*