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SCN18_14_9_16_R3_B_scaffold_5_116

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(124366..124965)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY37_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 195.0
  • Bit_score: 156
  • Evalue 2.10e-35
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 195.0
  • Bit_score: 156
  • Evalue 6.00e-36
Uncharacterized protein {ECO:0000313|EMBL:KIC95801.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 183.0
  • Bit_score: 156
  • Evalue 2.30e-35

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
TTGCATAACTATCATTCATACGCTGATCCGGCACTCCTGCAGCAAATCGCGCAGGGTGAGCAGGCGGCTTTCAATATACTTTTTGAAAGACACCGGGCTAAGCTGTATGACTATTTGTTTGATATCACCAAATCAAGGGAGATCGCTGAAGAGCTGCTGATGGATGTGTTTCTTAAAATTTGGTATGGCCGTGAACTCGCCCCGCAAATACAAAACGTTGATGCTTTTCTTGCCCGGATCGCGCGCAACAAAGCCATTAATTTTTTGACCACGACCGCCAGGAGGAAACACCTGCAAAAACTGGTGGCCTATGGCATGGCCGAGCATGTAGAGAATCCTGCCGAGCAGGTACTTGCGGAAAAAGAATACCAGCAATTCCTTCGTGAAGCATTGGATCAACTCTCTCCTCAGCGACGACTGGTATTTACTTTATCCCGTGAACAGGGAATGAACCATAGCGAAATTGCGTCAACATTACAACTATCCCGGCAAACCGTGAAAAATCACATGACCGAAGCGCTGAAATCCATCAGGGAATTTCTGGTAACGCAAAAAGGACAACATGGACTGCTGGTGGCAATACTGTTCTTTACCAAATAA
PROTEIN sequence
Length: 200
LHNYHSYADPALLQQIAQGEQAAFNILFERHRAKLYDYLFDITKSREIAEELLMDVFLKIWYGRELAPQIQNVDAFLARIARNKAINFLTTTARRKHLQKLVAYGMAEHVENPAEQVLAEKEYQQFLREALDQLSPQRRLVFTLSREQGMNHSEIASTLQLSRQTVKNHMTEALKSIREFLVTQKGQHGLLVAILFFTK*