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SCN18_14_9_16_R3_B_scaffold_5_124

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(138871..139428)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSB4_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 180.0
  • Bit_score: 144
  • Evalue 7.70e-32
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 180.0
  • Bit_score: 144
  • Evalue 2.20e-32
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACU03459.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 180.0
  • Bit_score: 144
  • Evalue 1.10e-31

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGAAATCCTACTGTACATACGACGATGGCACGCTTGTGCGCCTGATCGCTTCCGATGGGGAAGCCGCATTTGCGGAGTTGTATGACCGTTATTGGATACGGTTATTGTCGCGGGCTAAAGTCTTGTTAAACAGTTCTGTAGAGGCAGAAGAAGTAGTTCAGGATGTTTTTGTTACCCTTTGGAAAAAAGCGGCTACTATAAAGTTTGAAAAAACAGTTGCGTCTTACCTTTCGGCGATGCTGCAATACGCTTGTTTTAAACGACTCGCCGAAGCCAAACGATCACACGAAATAACAACCGATCTTAGTCCAATGGAGACAGCGGATGATTCGACAAGGGAATACCTGCAATTTGAGGCGCTACAAAAAGAACTGGAAGCGGCGGTCAGTGAACTGCCTGAACAATGCCAACTGATCTTTCGCCTTAGCCGCGAAGAAGGTTTAAGCGACCAGCAGATAGCAGATGAATTGGATCTTTCCGTCAATACAGTGCGAACGCAGAAACACCGTGCGCTAAAAAAACTGAAAACATCGCTGAACAGTTTTTTCCTGCTGTAG
PROTEIN sequence
Length: 186
MKSYCTYDDGTLVRLIASDGEAAFAELYDRYWIRLLSRAKVLLNSSVEAEEVVQDVFVTLWKKAATIKFEKTVASYLSAMLQYACFKRLAEAKRSHEITTDLSPMETADDSTREYLQFEALQKELEAAVSELPEQCQLIFRLSREEGLSDQQIADELDLSVNTVRTQKHRALKKLKTSLNSFFLL*