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SCN18_25_8_15_R4_B_scaffold_785_6

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(7394..8251)

Top 3 Functional Annotations

Value Algorithm Source
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 297.0
  • Bit_score: 288
  • Evalue 1.90e-75
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 297.0
  • Bit_score: 288
  • Evalue 9.30e-75
UDP-3-0-acyl N-acetylglucosamine deacetylase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRF5_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 297.0
  • Bit_score: 288
  • Evalue 6.60e-75

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACCCGCACCACACTCGCCAGGACCGTTACCGCCGAAGGCATTGCGCTGCACGCCGGCGTTTCTGTTCGCATGACGCTTACGCCGGCGCCTCCAGGACATGGCATTGTTTTCCGCCGTGACGATCGCGGCAGCCGTACAATTCCCGCTCTTTACAACAAGGTGACCGAAACCCGCCTTGGCACTGTCATTGATGACGGGCAGGGGACACGTATCGGTGTCATTGAACACCTTATGGCGGCCATTGCCGGGGCGGGCATTGCTGATCTTCTGGTCACGCTTGATGGGCCGGAGCCACCCATTCTGGATGGCGACGCACTGTCCTATCTCTCCCTGATTGAGACGGGAGGGGTAACCACCGCGCGGGCGCCGGGTACGGCACTTCGGATTCTGAAGCCGGTCCGGGTCGAGGCTGGCAATGCCAGCGCGTCTTTGCTGCCAGCCCAAGTTCGCAGCTTCGCCTTCGATATTGAATTTTCCACCGCCGCCATTGGCCGACAGCGCTTTGATTGGACATTCTCTACAGATGGCTTCCGGCGGGAAATTGCCCCGGCCCGGACCTTCGGTTTCCTTCATGAATTGGAAGCCTTGCATCAAGCAGGGTTGGGGCGGGGCGCCAGCCTCGAGAATACGTTGGCGATCGACGGCGATCGGGTTGTCAACGCGGCCATCATGCGCTTTCCGGACGAGTTTGTTCGACACAAGATTCTGGACGCTATCGGGGATTTGGCGCTGGCGGGTATGCCCGTCATCGGCCGGTTCGTAGGTGTCCGCTCTGGCCATGCGTTGAATAATGCCTTGCTGCGGGCCTTGTGCGCTGATGCTTCCGCTTTCGAGCGGGTGGAGTTAACCCCTTAA
PROTEIN sequence
Length: 286
MTRTTLARTVTAEGIALHAGVSVRMTLTPAPPGHGIVFRRDDRGSRTIPALYNKVTETRLGTVIDDGQGTRIGVIEHLMAAIAGAGIADLLVTLDGPEPPILDGDALSYLSLIETGGVTTARAPGTALRILKPVRVEAGNASASLLPAQVRSFAFDIEFSTAAIGRQRFDWTFSTDGFRREIAPARTFGFLHELEALHQAGLGRGASLENTLAIDGDRVVNAAIMRFPDEFVRHKILDAIGDLALAGMPVIGRFVGVRSGHALNNALLRALCADASAFERVELTP*