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SCN18_25_8_15_R4_B_scaffold_2575_7

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(4981..5838)

Top 3 Functional Annotations

Value Algorithm Source
Phytoene/squalene synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX28_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 277.0
  • Bit_score: 219
  • Evalue 3.80e-54
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIM28520.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 277.0
  • Bit_score: 219
  • Evalue 5.30e-54
putative phytoene synthase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 264.0
  • Bit_score: 216
  • Evalue 9.10e-54

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGAGCGGGACGATTCCTTTGCGGCGTGTGGGGCCATGGTGCGGGCCCGCGATGCGGATCGCTATTTCGCCGCCCTGTTCGCGCCGAAGGAAACGCGCGGTGCGTTGTTCGCGCTTTATGCCCTGAATTACGAGTTGGCGCATGTGGGCGAAAGCGTGCGCGAGCCCATGGTGGGCGACATCCGCATGCAATGGTGGCGCGAAACGCTGGAAAGCGCGCGGGACGGGCATCCACGGGCCCATGTGGTGGCGCATGCACTGGCCGCTGCGATGGCGGCGCAGGATTTGCCGGGGGACTTGTTCGAGCGGATGATCGAGGCGCGCGGGTTCGATTATCTCGACGGCTATTTCACCGATTGTGCCGAGCTGGAATCCTATGCCGCCGATACGGCGGGCGCGCTGATCCAACTGGCGCTGCGGGCGGCTGGTGCCACGGTAGCCAAGGATGAAGCCGCACTGGATGAGGCGGCACGGGAAGCGGGCATCGCCTATGCCCTGTGCGGCTTGCTGCGCGCATTGCCGCATCACGCGGCGCGGCGCAAGCTTTATCTGCCGCTGGATGTGCTGGCGGCGCACGCCATATCGCCGGAAGATATATTTTCCGGGCGTGACAGTGAGGGCTTGCGCGCGGCGGTTGCCGCGATTGCGGCACGGGCACGCGCCCATCTCGATGCGGCGCGGGCGCTTGGGCGGCCGGGGGCGAAAGCGTTGCCGGTGTTTCTGCCGCTGGGGCTGGTGCCGCTTTACCTGAAACAGATGGCTGCGCCGGATTTCAATCCTTTCCGCATGGCGGTGGAATTGCCGCTCTACCGCCGGCAATGGCGCTATCTGACCGCGGCGCTCAGCGGGCGGGTCTGA
PROTEIN sequence
Length: 286
MERDDSFAACGAMVRARDADRYFAALFAPKETRGALFALYALNYELAHVGESVREPMVGDIRMQWWRETLESARDGHPRAHVVAHALAAAMAAQDLPGDLFERMIEARGFDYLDGYFTDCAELESYAADTAGALIQLALRAAGATVAKDEAALDEAAREAGIAYALCGLLRALPHHAARRKLYLPLDVLAAHAISPEDIFSGRDSEGLRAAVAAIAARARAHLDAARALGRPGAKALPVFLPLGLVPLYLKQMAAPDFNPFRMAVELPLYRRQWRYLTAALSGRV*