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SCN18_25_8_15_R4_B_scaffold_2174_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 283..723

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 211
  • Evalue 5.70e-52
RNaseH ribonuclease n=1 Tax=Methylopila sp. M107 RepID=UPI00037CE438 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 138.0
  • Bit_score: 213
  • Evalue 1.10e-52
ribonuclease H similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 211
  • Evalue 1.10e-52

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
TTGAGTTTTCCGCGTGTCGATATTTTCACCGACGGTGCCTGTTCAGGAAATCCGGGACCCGGCGGTTGGGGCGCGATTTTACGCGCGGGCGCCCATGAGCGCGAAATTTCCGGCAGCGAAAATCCGACCACCAACAACCGGATGGAAATCCTGGCGGCCATCAGGGGTCTTCAGGCATTGAAGCGGCCGTCAGATGTCACCATCCACACCGATTCCCGCTATCTTCTGGATGGAGCGACGAAATGGCTCGCCCGCTGGAAGGCCAATGGCTGGCGCACGGCAGATAAAAAACCGGTCAAGAACGAAGACCTTTGGCGGCTGCTGGAAACCGAAATGGAAAAGCACGCCGTGGCATGGCAATGGGTCAAAGGCCATTCCGACCATCCGGAGAATGAACGCGCGGACGCCCTAGCCCGCGCGGCCATTTCCGCAAATCGATAA
PROTEIN sequence
Length: 147
LSFPRVDIFTDGACSGNPGPGGWGAILRAGAHEREISGSENPTTNNRMEILAAIRGLQALKRPSDVTIHTDSRYLLDGATKWLARWKANGWRTADKKPVKNEDLWRLLETEMEKHAVAWQWVKGHSDHPENERADALARAAISANR*