ggKbase home page

SCN18_25_8_15_R4_B_scaffold_2784_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 421..1983

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMP4_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 511.0
  • Bit_score: 588
  • Evalue 4.30e-165
glycine/betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 511.0
  • Bit_score: 588
  • Evalue 1.20e-165
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 511.0
  • Bit_score: 604
  • Evalue 1.40e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGGGGGGAACGCGGGCCTCTTTCGCGGCCGCCCTGGCCAATCTGCCGGATTATCTGGGCCAGCATGTGCTGCTCAGCCTGTCGGCGCTTCTGCTCGGGCTCGCGATCAGCCTGCCGCTTGGCATTATCGCCGCCCGCTCGCGCGTGTTGCGCGGGCCGGTGCTGGGTTTTGCCAGCATGATCCAGACCATCCCGAGCCTCGCTCTGCTGGCCCTGTTCTATCCGGTACTGCTGGTTCTGTCGGTGTTCGCGCAATCGACCTTCGGGGCCGGTTTCCGCGCGCTGGGCTTTCTGCCCGCGCTGCTGGCGCTGACGCTCTATTCCATGCTGCCGGTGCTGCGGAACACGGTTTCGGCCATCACCGGCATCGACCCGGCGGTGATCATGGCGGCACGCGCCGTCGGCATGACCAAACGGCAAACCCTGTTTCTGGTCGAACTGCCGCTTGCCGCCCCCGTCATCATGGCCGGCATCCGCACCGCCGCGGTGTGGGTGATCGGCACCGCCACCCTGTCCACCCCCGTGGGCCAGACCAGCCTCGGCAATTACATCTTCACCGGCCTTCAGACCGAGAACTGGATTTTCGTTCTGTTCGGCTGTGTCGCGGCCGCCCTTCTGACCATGGTGGTGGATCGGCTTCTGGCACTGGCCGAACAGAGCTTCAGCGAACATTCCTTCGCCAAGCTGATTGCCTGTCTTGTCGGCCTCGCCCTCGTGGTGGGGGCAAGCCTTGCGCCCATGCTGGCCAGCGGGCGGGCCGATGTGGTGGTCGGGGTCAAGAATTTCAGCGAGCAGTATATTCTGGGCTCGCTGATCGAACGGCATTTGGCGGAAGCCGGTTTCAGCACGGTGCGGCGCGACAATCTCGGCTCCGCCGTGGTCTTCCGGGCGCTCACCGCGAACGACGTCAATGTCTACATCGATTATTCCGGCACCATCTGGACCAACGAGATGAAGCGCACCGGCAATCCCGGCCGCAAGGTGATGCTGCGCGAAATCCGCAAATGGCTGAAAGACAATTACGGCGTTGCCGATCTGGGCGCGGTGGGTTTTGAAAACGCCTATGCCTTTGCCATGCGGCGCGACCGGGCAGAGGCGCTCGGCATCCACACCATTGCCGATCTGGCGGCGCACGCCTCCCAACTCAAGCTCGGTACCGATTATGAATTTCCCAGCCGGCCTGAATGGCGCGCGGTGTCAAAGGCCTATCACTTCGATTTCGCGGTCAAGCGGCAGTACCAGCCGAATTTCATGTATCGCGCGGTTGAAACCGGCGATGTCGATGTGATTTCCGCCTTTTCCAGCGACGGGCGCATCGCGCAATACGATCTTGTGGTGCTGGGCGATCCCAAAGGCGCGCTGCCGCCTTACGATGCGATCATTCTGGTCTCGCCCTCCCAGGCCCATGATGAAAAACTTTTAAAGGCGCTGGAGCCCTTGGTCGGTGCGATCGATCTCGAAACCATGCAGAAGGCCAATCTGATGGTGGATCGCAGCACCAACAAGCGCACCCCGCGCGATGCCGCGATCTGGCTTGATCGTCAAATCAGTACCGGGCACTAA
PROTEIN sequence
Length: 521
MGGTRASFAAALANLPDYLGQHVLLSLSALLLGLAISLPLGIIAARSRVLRGPVLGFASMIQTIPSLALLALFYPVLLVLSVFAQSTFGAGFRALGFLPALLALTLYSMLPVLRNTVSAITGIDPAVIMAARAVGMTKRQTLFLVELPLAAPVIMAGIRTAAVWVIGTATLSTPVGQTSLGNYIFTGLQTENWIFVLFGCVAAALLTMVVDRLLALAEQSFSEHSFAKLIACLVGLALVVGASLAPMLASGRADVVVGVKNFSEQYILGSLIERHLAEAGFSTVRRDNLGSAVVFRALTANDVNVYIDYSGTIWTNEMKRTGNPGRKVMLREIRKWLKDNYGVADLGAVGFENAYAFAMRRDRAEALGIHTIADLAAHASQLKLGTDYEFPSRPEWRAVSKAYHFDFAVKRQYQPNFMYRAVETGDVDVISAFSSDGRIAQYDLVVLGDPKGALPPYDAIILVSPSQAHDEKLLKALEPLVGAIDLETMQKANLMVDRSTNKRTPRDAAIWLDRQISTGH*