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SCN18_25_8_15_R4_B_scaffold_1876_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 3310..3879

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134M3_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 166.0
  • Bit_score: 160
  • Evalue 1.10e-36
Chemotaxis protein CheY {ECO:0000313|EMBL:KIZ32994.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 166.0
  • Bit_score: 163
  • Evalue 2.30e-37
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 166.0
  • Bit_score: 160
  • Evalue 3.00e-37

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGTTTGGCGCGAAGGCGCGGACCGGGCCGCGCCAAATCCGGGCCGCCATGACCTATCGCTTCGACCGGCTGAAAATCCTTGTCGTCGACGACAATCCGCATATGCGCAAATTGCTGGCGGCCATCCTGCAGGCCGCCGGTGTCACGCAATTGTTTCAGGCAGAGAGCGTCGCCACAGCCTGGGCCGCATTCAACGAGGCGAACCCCGACATTGTGTTCGTGGACTGGATGCTGAATGGGCCGAGCGGGCTTGAACTGGTGCGGATGATCCGTACCGACGCCAAATCCGCAAACCCGCTTGTGCCGGTGATCATGCTGACCGGCTACACCCAGATCGAGCACGTCATTCAGGCGCGCGACGCCGGTGCAACCGAATTTCTCGCAAAGCCGGTGTCGGCCAAATCCATTCTGGCGCGGCTGGTTGCGGTGATCGAATATCCGCGCGCCTTCGTGCGAACGAAATACTATTTCGGGCCGTGCCGCAGACGCCACAGGCCGGGCGATTACCGCGGACAGGAGCGCCGCAGCGCCGGGAGTGAGGTCGCCATCGACATGCCACCAAAGCCCTGA
PROTEIN sequence
Length: 190
MFGAKARTGPRQIRAAMTYRFDRLKILVVDDNPHMRKLLAAILQAAGVTQLFQAESVATAWAAFNEANPDIVFVDWMLNGPSGLELVRMIRTDAKSANPLVPVIMLTGYTQIEHVIQARDAGATEFLAKPVSAKSILARLVAVIEYPRAFVRTKYYFGPCRRRHRPGDYRGQERRSAGSEVAIDMPPKP*