ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1892_6

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(4059..4643)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B471E3 similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 141.0
  • Bit_score: 101
  • Evalue 6.00e-19
MarR family transcriptional regulator {ECO:0000313|EMBL:KCZ88851.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 191.0
  • Bit_score: 112
  • Evalue 6.20e-22
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 149.0
  • Bit_score: 89
  • Evalue 8.70e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCGTACACCGATCGTCATACTTATCTGATGGCCGGCCTGCTCGAAGGCTGGGACTGGTTCGACAACGGGTTGCAGGACCTGGTGAAGGCCGCCGGTTTCCGGCCGCTGAACAAGTCCCAATCCATGATGGTTCTTTATATGTCGTCCGGCGTCAGCAAGCCGATCGAGATTGCGCGCAAGATGCGGCTGTCGCGGCAGGCGATCCGCCACATCTCCAACCAGTTGGTGGAGATGGACATCATCACGATTGCCGATAACCCGGATGACGGGCGTTCCAAGATCCTGTCTTTCACCGAACGCTCCACCGGCATCCGCAACGCGGCGGCGCAGGCGATCCGCGATCTGGAGAAGACGCTGCGCGCGCGCATCGGGCCCGCCGAATACAATCAGCTCAAGCATATTCTCAACATGGATTGGGGGCCGGTGATCAAATCGCCCCGCGATCTTCGCGCCAGCGGCAACGGGCATGGCACGGGCAAGACAGCGCCGGCCGCAAAACAAGGTCCGAAGCCGCGCCGCAACGCCAACACCCGCCGCGCAGGCCTCGTGCAGAAGAAAAAGCGGCAAACCAGCCTGGTCTGA
PROTEIN sequence
Length: 195
MAYTDRHTYLMAGLLEGWDWFDNGLQDLVKAAGFRPLNKSQSMMVLYMSSGVSKPIEIARKMRLSRQAIRHISNQLVEMDIITIADNPDDGRSKILSFTERSTGIRNAAAQAIRDLEKTLRARIGPAEYNQLKHILNMDWGPVIKSPRDLRASGNGHGTGKTAPAAKQGPKPRRNANTRRAGLVQKKKRQTSLV*