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SCN18_25_8_15_R4_B_scaffold_1892_8

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(6205..8010)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 623.0
  • Bit_score: 500
  • Evalue 1.80e-138
TonB-dependent receptor {ECO:0000313|EMBL:KGB53228.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 612.0
  • Bit_score: 519
  • Evalue 4.00e-144
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 611.0
  • Bit_score: 496
  • Evalue 9.60e-138

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
GAGATATTGCGCGGGCCGCAGGGCGCGCTTCTGGGCAAGAACACGGCGGCCGGTGCCGTCAGCGTGATTTCAGCCGGGCCGACCGATGCGTTCGAAGCCGCCGCCACCGCGAGTTACAATTTCAGCCGTTCCGGCTTCGATGCCCATGGCTATATCTCCGGCCCCCTTACCGATGGTCTGAGCGCGCGCTTCGCCCTCAAGCTCACCCATCTCGACGGCTACATCAAAAATCCGCTGACCGGGCGCAACGACGTTTCCCCGCACAACAATGTCGGCCGCCTGACCCTGAAATATGAGCCGGTCAGCAATCTGGATGTCACGCTGAAATACGAATTCGGCGATTATAAAACCTGGGGCTTTCCGCAAGTGCATGTTGCCGCGGTGGGGCCGACGCACATCCAGGCGGTGCGGTATGCCGAAGAGCCGTTTGGCATGCGCGAGGTGGACAAGCAGACCAGCCACAACGGTGCCTTGACCGCCAATTGGGGCATCGGCGATTTCACGCTGACCGCCATCACCGGGATTTCGGCCTTCCGTTCCTACCAGAACACCAGCGGATCCGGCGGCTCACCCGAAAGCTGGCTTTCGATCTTCAGCGAGAAGTTCAACCAGTTCTCGCAGGAGGTGCGCCTGCTCTCCCCCACGGGCCAGACATTTGAATGGATCGCGGGCGCCTATTACGATCAATCGTCCTACGACTTTGTTCCGGTCTCGCGCTATGATCTGTTCGGCGGCGCGGTCGCGGGCCAGATGCATATCGACTTCGCCCAGCGCGCCAGAAGCTGGTCGGTATTCGGGCAAGGCACCTATCACGTCATGGACACGCTGCGCCTGATCGGCAGCCTGCGCTATACCGAGACGCGCAAGAACGGTATTTACAATCTGCAGCTCGATTACGGTATTCCGCTGAGCCCGCCGCACGCGATCCCGCGCACCGATATCAACGAAAGCAATCTCGATCCGTCGATCACGCTGCAATATGACGTGCTGCCGGGCGTGATGACCTATGTCAGCTATGGGCGGGGATCGAAGGCGGGCGGCTTCGTCAGCAGTTCGCGCACCGCCACGCCATCGACCTTTGCGTTCGGCGCGGAAAAATCCAGCAACATCGAACTGGGCGCCAAGGCGACGTTGCTGGAAGGCCGGTTGATGGCCAGCGTTGCGCTTTACCGCACCCGCTTCGAGGACCTTCAGGTCTCCAACTACGATTCGGTGCTTGCCACCTTCGTCACCCGCAACGCGGCAGCCGCGACCAGCAAGGGCGTCGAGGCCAATGTGGACTGGATGGTTCTGGACAATCTGCAGATCTCGGCCTCTGCCGCCTATCTCGACGCGATTTACAACGACTTTCCCGGCGCAAGCTGCCTGTGGGCGCAACCCCTGTCGGTCTGCAACCCCAATGCACCGGCAACCGCGCCCAATTCGCAGGCCTTCAACAATATCGGCGGCACGGTGATGCCCTTCACCGCCAAATGGTCGGGCAATGTGCGCGCCCAGCACACCTTGCCGCTGGACGATGATCTGAAGCCGACCACAATGGGCGTTGTCAGCTTCCGCAGCGCATCGTTCACCGGCAACAACCTCAATCCCTATTACGGCCGCCAGCCCTCCTACGCGAAACTGGACCTGCGCGTGGAGATCGGCGACCGGGAAGACCGCTGGGCGGTGGCACTGGTCGGCAAGAACGTGACCAACCAGTTGACGGAGACCAACGGCTATCTGTGGCCGCTGTCATCACCACCGACAGGCATCAATATCCTGGACGAAACCCGGCAAATCTCGCTGGAAGGCCGTATCCGGTTTTAG
PROTEIN sequence
Length: 602
EILRGPQGALLGKNTAAGAVSVISAGPTDAFEAAATASYNFSRSGFDAHGYISGPLTDGLSARFALKLTHLDGYIKNPLTGRNDVSPHNNVGRLTLKYEPVSNLDVTLKYEFGDYKTWGFPQVHVAAVGPTHIQAVRYAEEPFGMREVDKQTSHNGALTANWGIGDFTLTAITGISAFRSYQNTSGSGGSPESWLSIFSEKFNQFSQEVRLLSPTGQTFEWIAGAYYDQSSYDFVPVSRYDLFGGAVAGQMHIDFAQRARSWSVFGQGTYHVMDTLRLIGSLRYTETRKNGIYNLQLDYGIPLSPPHAIPRTDINESNLDPSITLQYDVLPGVMTYVSYGRGSKAGGFVSSSRTATPSTFAFGAEKSSNIELGAKATLLEGRLMASVALYRTRFEDLQVSNYDSVLATFVTRNAAAATSKGVEANVDWMVLDNLQISASAAYLDAIYNDFPGASCLWAQPLSVCNPNAPATAPNSQAFNNIGGTVMPFTAKWSGNVRAQHTLPLDDDLKPTTMGVVSFRSASFTGNNLNPYYGRQPSYAKLDLRVEIGDREDRWAVALVGKNVTNQLTETNGYLWPLSSPPTGINILDETRQISLEGRIRF*