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SCN18_25_8_15_R4_B_scaffold_1940_7

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(6376..7236)

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 283.0
  • Bit_score: 292
  • Evalue 6.50e-76
hemC; porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 283.0
  • Bit_score: 285
  • Evalue 1.20e-74
Porphobilinogen deaminase n=2 Tax=Ochrobactrum intermedium RepID=C4WJT6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 283.0
  • Bit_score: 292
  • Evalue 4.60e-76

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGCGCGTGCCGCGCTCGAGGCGCTGGGCGTCGCTTGCGAGGTGGTGACGCTAACCACCTCGGGCGACCGCTTTCAATCCGCGCCGCTGGCCGATGCGGGCGGCAAGGGCCTTTTCACCAAGGAACTGGAAGAGGCGCTGCTGGCGGGCACGATCGATCTCGCCGTGCATTCGATGAAAGACGTCCCGGCCGTGCTGCCGAAGGGGCTTATGCTCGCGGCCTTCCTGCCGCGGGCCGACCCGCGCGATGCCTTTTTGTCTGCAAAGGCGCCTTCGTTGGCCGCATTGCCATCGGGCGCGCGTGTCGGCACCAGTTCGGTCCGGCGCACGGCCCAACTCGCCCGCCTGCGGCCCGATCTGCAAAGCGTGCTGTTGCGCGGCAATGTCGATACCCGATTGACGAAGCTCGATGCCGGCGGTTTCGATGCCGCCATTCTTGCGTGTGCGGGTTTGCTGCGGCTCGGGCTTTCCAATCGCATTACCGCGGTGCTGGAGCCTGCGGACTGGCTGGGCGCACCGGCGCAAGGCGCCATCGGAATCGAAGTCCGCACGACCGATGCCAATACGCGGCATTGGGTTGAGAAGCTCAATCATGCGCCGACTGCGATCACCATCGCCTGTGAACGCGCGTTCCTGGCGGCGCTGGATGGCTCGTGCCGCACGCCGATTGGCGCGCTCGCAACCCTTGATGGTGCAACGCTGCGGTTTCACGGCGAGATTCTCGCACCCGATGGCAGCGATCACGCGGAAGCCCGTTTTGAAGCGGTGTTGTCCGGTGACATGCTGGAAAATGCCGGCCGGCTTGGGCACGAGGCTGGTCATTCGCTGCGGCCGAAAGCGGCGCCATGGCTTGACCTCTGA
PROTEIN sequence
Length: 287
MARAALEALGVACEVVTLTTSGDRFQSAPLADAGGKGLFTKELEEALLAGTIDLAVHSMKDVPAVLPKGLMLAAFLPRADPRDAFLSAKAPSLAALPSGARVGTSSVRRTAQLARLRPDLQSVLLRGNVDTRLTKLDAGGFDAAILACAGLLRLGLSNRITAVLEPADWLGAPAQGAIGIEVRTTDANTRHWVEKLNHAPTAITIACERAFLAALDGSCRTPIGALATLDGATLRFHGEILAPDGSDHAEARFEAVLSGDMLENAGRLGHEAGHSLRPKAAPWLDL*