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SCN18_25_8_15_R4_B_scaffold_4140_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(1312..2124)

Top 3 Functional Annotations

Value Algorithm Source
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 273.0
  • Bit_score: 330
  • Evalue 4.10e-88
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 273.0
  • Bit_score: 330
  • Evalue 2.00e-87
Tryptophan synthase alpha chain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEF8_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 274.0
  • Bit_score: 329
  • Evalue 1.90e-87

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGAGCCGTATCGCCTCCCGTTTCGCCGCCTTGAAGAAACAGGGCCGCGCCGCCTTCATTCCTTTCATCACCGCCGGCGATCCCGATGCGGAAACCACGCTGGCGCTGTTGAATCGTTTGCCGTCCGCCGGTGCCGATCTGATCGAGCTGGGCGTGCCGTTTTCCGATCCGATGGCCGATGGCCCGGCCATTCAGGCTTCTTCGCAGCGTGCGCTGAAGGCGGGCATGACACTCACGCGCCTGCTCGATCTGGTGCGGGCCTTCCGCAAGACCGACGGCGAAACCCCGATCGTGCTGATGGGCTACTACAATCCGATCCATGCCTATGGCACCGCGCGCTTCGTGAAAGATGCGGCGGAGGCTGGCGTCGATGGCCTGATCACCGTCGATCTGCCGCCGGAAGAAGATGAGATGCTGCGCGTGCCGGCCTCCACGCATGGCCTCGACATCGTGCGCCTCGCCACACCGACAACGGATGATAAGCGCCTTCCCGCCGTGCTGGATGGCGCGGGCGGCTTTCTTTATTACGTCTCCATCACCGGCATCACCGGCACCAAGAGTTTTCAGGAAGAAAGCGTTCGCGATGCCGTGTTGCGGCTGAAGGCGCGCGCGGGCCTTCCCGTGGTTGTCGGCTTCGGCATCAGAACGCCGGAACAGGCGGCGGCCATCACCCGTTTTGCCGATGGTGCCGCGGTCGGCACCGCGATTGTGGAGCGTGTTGCGGCGGTTTCCAGCCCCGGCGGCATCGACGGCGTGGTGGAATTCTGCCGCCAACTGGCAGATGCGGTACACACACCCAATGTGGTAGGGTGA
PROTEIN sequence
Length: 271
MSRIASRFAALKKQGRAAFIPFITAGDPDAETTLALLNRLPSAGADLIELGVPFSDPMADGPAIQASSQRALKAGMTLTRLLDLVRAFRKTDGETPIVLMGYYNPIHAYGTARFVKDAAEAGVDGLITVDLPPEEDEMLRVPASTHGLDIVRLATPTTDDKRLPAVLDGAGGFLYYVSITGITGTKSFQEESVRDAVLRLKARAGLPVVVGFGIRTPEQAAAITRFADGAAVGTAIVERVAAVSSPGGIDGVVEFCRQLADAVHTPNVVG*