ggKbase home page

SCN18_25_8_15_R4_B_scaffold_6337_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(1971..2729)

Top 3 Functional Annotations

Value Algorithm Source
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 252.0
  • Bit_score: 386
  • Evalue 2.20e-104
imidazole glycerol phosphate synthase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B64043 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 252.0
  • Bit_score: 387
  • Evalue 5.50e-105
imidazole glycerol phosphate synthase subunit HisF similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 383
  • Evalue 2.90e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGTTGAAGGTTCGCATCATCCCCTGTCTCGATGTGAAAGACGGCCGCGTCGTCAAGGGCGTGAATTTCGTCAATCTGCGCGATGCGGGCGATCCGGTGGAGCAGGCGATCATCTATGATCGCGCCGGTGCCGATGAATTGTGCTTTCTCGATATCGCGGCCAGCCACGAAAAGCGCGGCATCCTGCTCGACGTGGTGCGGCGCACGGCAGAAGTTTGCTTCATGCCGCTGACGGTCGGCGGTGGGGTGCGCACGCTGGATGATATCCGCAGCCTGCTGCTCGCCGGCGCGGACAAGGTCGCAATCAATACGGAGGCTGTGCGCCGGCCCGAAATCGTGCGCGAAGCGGCGGAGAAATTCGGCAGCCAGTGCATCGTGGCGGCGATCGATGCCAAGCGTGGCACAAGCGGTGCGTTCGAGGTTTTCACCCATGGCGGGCGCAATGCCACGGGCATCGATGCGATTGTGCATGCCCGCAGGCTGACGGCCTTTGGCGCCGGTGAAATCCTCCTCACCTCGATGGACCGGGATGGAACCAAATCCGGCTATGACATTCCGCTCACCCGCGCGGTCAGCGATGCGGTTTCCGTGCCGGTGATCGCATCGGGCGGTGTCGGCAGTGTGGATGATCTGGTCGCTGGTGTGCGCGATGGCGGGGCCAGTGCGGTTCTTGCCGCCTCGATCTTCCATTTCGGTCAGGCGACGATTGCCGATGCCAGGCGGGCATTGTCTGATGCGGGCATTGCGGTGCGGCCATGA
PROTEIN sequence
Length: 253
MLKVRIIPCLDVKDGRVVKGVNFVNLRDAGDPVEQAIIYDRAGADELCFLDIAASHEKRGILLDVVRRTAEVCFMPLTVGGGVRTLDDIRSLLLAGADKVAINTEAVRRPEIVREAAEKFGSQCIVAAIDAKRGTSGAFEVFTHGGRNATGIDAIVHARRLTAFGAGEILLTSMDRDGTKSGYDIPLTRAVSDAVSVPVIASGGVGSVDDLVAGVRDGGASAVLAASIFHFGQATIADARRALSDAGIAVRP*