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SCN18_25_8_15_R4_B_scaffold_7014_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 343..1023

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 197.0
  • Bit_score: 216
  • Evalue 7.20e-54
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 197.0
  • Bit_score: 216
  • Evalue 3.60e-53
Ribonuclease HII n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKA8_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 197.0
  • Bit_score: 236
  • Evalue 1.40e-59

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGCTGGCCGCGAAGGCTCTCTCTGCTACGCTGCCGCCATGCCGCATTACATTTACGAGTCGCGCCTGTTGAAGACGATGGCAGGCCCCATTGCCGGCGTCGATGAGGCGGGCCGTGGCCCCCTTGCCGGGCCGGTGGTTGCGGCGGCCGTCATCCTCGAACGCGGGCGCATTCCGAAAGGGATCGACGATTCCAAGCAGGTGCGCCCCGAAGCGCGCGAAGACCTCTACGCGCGCATCACCGAATCCGCGCTGGCCTGGGGCGTGGGCGAAGCCAGTGTGGACGAGATCGATCTCGTCAATATCCGTCAGGCGACGCATCTCGCCATGGCGCGTGCCGTCCGCGCGCTTACCATCGCGCCGATGTTCGCACTGGTGGATGGGAACGACGCGCCCGCGCTCGCTTGCCCTTGCGATACGCTGGTCGATGGCGATGCGCGCTCGCTCTCCATCGCGGCCGCCTCCATTATCGCCAAGGTCACGCGCGACCGCATGATGCGCACGCTGCATGACGAACATCCCGTCTATGGCTGGATCACCAATATGGGTTACGGCACAGGGGAGCATCTGGCGGCGCTGACCCGCCACGGCCCCTGCCGTCATCACCGGCGCAGTTTCGCCCCGGTCCGCCGCCTGCTGGCCCCCGAAACGGCTCCGGATACGCTTGTGGATACCCCCTGA
PROTEIN sequence
Length: 227
MAGREGSLCYAAAMPHYIYESRLLKTMAGPIAGVDEAGRGPLAGPVVAAAVILERGRIPKGIDDSKQVRPEAREDLYARITESALAWGVGEASVDEIDLVNIRQATHLAMARAVRALTIAPMFALVDGNDAPALACPCDTLVDGDARSLSIAAASIIAKVTRDRMMRTLHDEHPVYGWITNMGYGTGEHLAALTRHGPCRHHRRSFAPVRRLLAPETAPDTLVDTP*