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SCN18_25_8_15_R4_B_scaffold_11493_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 524..976

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R RNase R protein {ECO:0000313|EMBL:ERL47229.1}; EC=3.1.-.- {ECO:0000313|EMBL:ERL47229.1};; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 138.0
  • Bit_score: 176
  • Evalue 1.60e-41
Ribonuclease R RNase R protein n=1 Tax=alpha proteobacterium RS24 RepID=U2WCG4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 138.0
  • Bit_score: 176
  • Evalue 1.10e-41
histidine triad (HIT) protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 139.0
  • Bit_score: 173
  • Evalue 2.70e-41

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGACGTATGATTCCAACAATGTGTTTGCGAAAATTCTGCGCGGTGAAATTCCATCCGTGAAAGTGTATGAGGACGCGCATGTCCTCTCCTTCATGGATGTGATGCCGCAAGTGGAAGGCCACACCCTGGTCATTCCGAAAGAACCGGCCGTGGACATGCTGGACCTTTCACCGGAAGGGGCCGCCGAATTGATCAAGGCGACGCAGCGGATTGCGAAGGCGGTGAAAAAGGCGCTGGCCCCGCCGGGCATCATGCTGATGCAACTGAACGGCGCCGCCGCCGGACAGAGTGTGTTTCACATCCATTTCCATATTCTGCCACGGCATGCCGGGATCGACATGAAGCTGCATGCGCGCGAGATGGTGGACCCCAAAACGCTGGAGCCGCTCGCCGCGAAGATTCGCGCGGCGCTCGACCGATGCAATTTCGGGGATTTGGCGAAGATGGGGTGA
PROTEIN sequence
Length: 151
MTYDSNNVFAKILRGEIPSVKVYEDAHVLSFMDVMPQVEGHTLVIPKEPAVDMLDLSPEGAAELIKATQRIAKAVKKALAPPGIMLMQLNGAAAGQSVFHIHFHILPRHAGIDMKLHAREMVDPKTLEPLAAKIRAALDRCNFGDLAKMG*