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SCN18_25_8_15_R4_B_scaffold_17044_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 3..176

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 57.0
  • Bit_score: 107
  • Evalue 1.20e-21
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 57.0
  • Bit_score: 107
  • Evalue 5.90e-21
DNA-directed RNA polymerase subunit beta n=1 Tax=Amorphus coralli RepID=UPI00037FF2E4 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 57.0
  • Bit_score: 107
  • Evalue 2.50e-21

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
ACCTTGCAGGAAATCCTGACCGTGAAGTCCGACGACGTGGCCGGCCGTACCAAGGTCTATGAAGCCATCGTCCGCGGTGAGGACACGTTTGAAGCCGGTATCCCGGAATCCTTCAACGTGCTGGTGAAGGAAATGCGCTCACTGGGCCTGAATGTGGAGCTTGTGAACGGTTAG
PROTEIN sequence
Length: 58
TLQEILTVKSDDVAGRTKVYEAIVRGEDTFEAGIPESFNVLVKEMRSLGLNVELVNG*