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SCN18_25_8_15_R4_B_scaffold_17057_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(1..600)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:KIL97415.1}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 200.0
  • Bit_score: 331
  • Evalue 5.20e-88
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 200.0
  • Bit_score: 330
  • Evalue 1.80e-88
3-isopropylmalate dehydratase small subunit n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=LEUD_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 200.0
  • Bit_score: 330
  • Evalue 6.30e-88

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGAACCATTCACCACCCTGACGGGGGTTGCCGCCCCCCTGCCGATGATCAACGTCGATACCGACATGATCATCCCCAAGAACTTCCTGAAAACCATCAAACGCACCGGATTGGGCAAGGCGCTGTTCTTTGAAATGCGCACCAATGCCGACGGCAGAGAAAACCCCGATTTCGTGCTGAACAAGCCAGCCTACCGCAAGGCGCAGATTCTTGTGGCCGGTGAGAATTTCGGCTGCGGGTCGAGCCGGGAGCACGCGCCCTGGGCTCTGCTTGATTTCGGCATCCGCGTGGTGCTGGCCCCATCCTTCGCCGATATTTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCGATCAAGCTGCCGCAGGAAGACATCGACAAACTGCTGGATGATGCGGAGCGTGGCGCCAATGCGGTGATCACCGTCGATCTGGCGAAGCAGGAAATCCATGGGCCCGATGGCGGTACCATCAACTTTGAGATCGATCCTTTCCGCAAGCAATGCCTGCTGAATGGCTGGGACGATATTGCGCTGACCTTGCGTAACGAAGACAAGATTTCCGCATTTGAGGCACGGCGCAAAGCGCAAACGGCCTGG
PROTEIN sequence
Length: 200
MEPFTTLTGVAAPLPMINVDTDMIIPKNFLKTIKRTGLGKALFFEMRTNADGRENPDFVLNKPAYRKAQILVAGENFGCGSSREHAPWALLDFGIRVVLAPSFADIFYNNCFKNGILPIKLPQEDIDKLLDDAERGANAVITVDLAKQEIHGPDGGTINFEIDPFRKQCLLNGWDDIALTLRNEDKISAFEARRKAQTAW