ggKbase home page

SCN18_25_8_15_R4_B_scaffold_30006_1

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(3..476)

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZD9_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 177.0
  • Bit_score: 114
  • Evalue 7.30e-23
thioredoxin-like protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 177.0
  • Bit_score: 114
  • Evalue 2.10e-23
Thioredoxin-like protein {ECO:0000313|EMBL:ADZ68562.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 177.0
  • Bit_score: 114
  • Evalue 1.00e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGACCCGATCGCTCCTCATGCTTCTGGCGTCCATCGTCGTGGTGGTCGCGCTTGTGGTTCTATATTTGATCCCCGGCGGCAAGGGAACGGCAGAACGCCCGCCGTCGCTCGCCGCGTTAAAACCAGTGGAACAGGTGGCACCGGTGCCCGCGGTCAAATTCGTCGATGCGGCGGGGCGGACCTATTCGCTCAAATCCTATGAGGGGCGCTATGTCCTGCTCAATCTGTGGGCAAGCTGGTGCGCGCCCTGCGTCAAGGAACTGCCGGCGCTCGCCACATTGCAGCGGGCAGTCCCGGCCAGGAATCTGGCGGTGGTGACGGTCGATGTCGAGAAGGGCGCAAAGGACAAGGCCGCGGCCTTCCTGATCGCGCACAATGCGGCGGAATTGCCGGCCTTTGCCGACCCCGACCTGAAGCTGATGCAAGCCATCAAGGCGTTCGGCCTGCCCACCACCATCCTGATCGACCGGCAG
PROTEIN sequence
Length: 158
MTRSLLMLLASIVVVVALVVLYLIPGGKGTAERPPSLAALKPVEQVAPVPAVKFVDAAGRTYSLKSYEGRYVLLNLWASWCAPCVKELPALATLQRAVPARNLAVVTVDVEKGAKDKAAAFLIAHNAAELPAFADPDLKLMQAIKAFGLPTTILIDRQ