ggKbase home page

SCN18_31_3_15_R3_B_scaffold_129_28

Organism: SCN18_31_3_15_R3_B_SCNPILOT_EXPT_300_BF_Sphingomonas_67_13_68_146

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(44595..46712)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489B87 similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 704.0
  • Bit_score: 1091
  • Evalue 0.0
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB52161.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 697.0
  • Bit_score: 1096
  • Evalue 0.0
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 707.0
  • Bit_score: 1050
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
ATGCTTGAAGACGAGACAAGGGTGCGCCGGGCGGTGTCCGCCATTCCGTTCGCCGTGCCGCGCAACCGCTGGTCCGATGCGGAGGCCGCCGGCATGTCGCCGGAGGGGCTGCTGCTCTACCGGTCGAACCTGTTGGGTTCGGACCTGACCGTCACCAATTTCGGCGGCGGCAACACTTCGGCGAAGATCGCGATGGCCGATCCGCTCAGCGGCGCGCCGGCGACGGTGCTGTGGGTGAAGGGTTCGGGCGGCGATATCGGCTCGATGAAGCTCGACGGCTTCGCCACCCTCTATCTCGACAAGCTGCTCGGCCTCGAATCGCGCTATCGCGGCGTGGCGTTCGAGGACGAGATGGTCGCGTATCTGCCGCACTGCACGTTCAACCTGAACGCGCGCGCGGCGTCGATCGACACGCCGCTGCACGGCTATCTGCCCTATGCGCATGTCGACCATGTCCATCCCGATGCGATCATCGCGCTGGCGGCATCGAGCGCGGGCAAGGACGCGACCGACGCGATCTGGGGCGGCGCGGTCGGCTGGCTGCCCTGGAAGCGCCCGGGCTTCGAGCTCGGCCTGCAGCTCCGCAAGCTCGCCACCGAAAGCCCGAACCTGCGCGGCGTGATGCTGGAGGGCCATGGCATCATCTGCTGGGGCGACACCGCCAAGGCCTGTTACGACAACACGATCGCGCTGATCGCGGACGCGGCGGCCTATCTCAACGAACGCCTGGCCCAGGGCCCGGCGTTCGGCGGCGAAGTGACCCCGCCCCTCGCCGCCGATGACCGCGCCGTCCTCGCCGCCGCGCTGATGCCCCGGCTGCGTGGCCTGATGCGCGGCGCGCGCGGCAAGATCGGCCATTTCTCCGACGATCCCGAGACGCTGGAGTTCGCCGGCAGCCGCGATTTCGCCCGGCTGGCCGCGATCGGCACCTCGTGCCCCGATCACTTCCTGCGCACCAAGATCGCCCCGCTCACGCTCGATCCCGCCCGGCTCGACGACGAGGCCTATCTGGCCGACGCGCTGGAGGCGTATCGCCAAGGCTATGCGGCCTATTATCAGCGCTGCGCCGAGCCCGGCGATCCGGCGATGCGCGATCCCAATCCGGTGGTGGTGCTGATCCCCGGCATCGGCCGCATCACCTTCGCCGCCGACAAGACCACGGCGCGCCTGGCCGGCGAATTCTATGGCAACGCGATCAACGTGATGCGCGGCGCCGAGGCGATCGGCGATTATATCGGCCTGCCCGAGAAGGAAGCGTACGGCATCGAATATTGGGCGCTCGAGGAAGCCAAGCTGCAGCGCATGCCCAAGCCCAGGCCGCTGGTCGGCCGCATCGCACTGGTGAGCGGCGGTGCCGGGGGCATCGGCGCGGCCACCGTGCGGCGCCTGCTCCAGGACGGCGCCTGCGTGATGCTGGTCGACCGCGACGCCGAGGCGGCCGAGCGGGTCCGCGCCGAAATGGCCCAGGCCTTTGGCAAGGACGTGGTCCGCGCCGAGACCTGCGACGTCACTGACGAGCGGCAGGTCGCCGCGGCGTTCGAGGCGTGCACCCGCGAGTTCGGCGGGCTCGACATCCTGGTCGCCAATGCCGGCATCGCCTCTTCCGCTTCGGTGGAGGATACCAGCGTCGCGCTGTGGCGCCGCAACTACGACGTGCTGACCGAAGGCTATTTCCTCAGCGCCCGCGCCGCCTTCCCGCTGATGCGCGCGGTCGGCGGCGGCTCGATCGTGTTCATCGGCTCGAAGAACGCGCTGGCCGCGGCAGTCAACGCCTCCGCCTATGCCTCGGCCAAGGCGGCGTCGCTGCACCTCGCCCGCTGCCTGGCGCTGGAAGGCGCGCCGCACGGCATCCGCGTCAACACGGTCAACCCGGACGCAGTGATCAAGGGCTCGCGGATCTGGGACGGCGACTGGCGCAAGGAACGTGCCGGCGCGCACGGCATCGATCCCGGCTCGGAGCTGGAAGAGCATTACCGCAACCGCTCGATGCTCAAGCGCGACGTACTGCCCGAGGACGTGGCGGAGGCGGTGCATTTCTTCGCTTCCGAAGCCTCTTCCAAATCGACGGGCAACATCGTCAATGTGGATGCCGGGAACGCGCAGGCTTTCCCGCGATAA
PROTEIN sequence
Length: 706
MLEDETRVRRAVSAIPFAVPRNRWSDAEAAGMSPEGLLLYRSNLLGSDLTVTNFGGGNTSAKIAMADPLSGAPATVLWVKGSGGDIGSMKLDGFATLYLDKLLGLESRYRGVAFEDEMVAYLPHCTFNLNARAASIDTPLHGYLPYAHVDHVHPDAIIALAASSAGKDATDAIWGGAVGWLPWKRPGFELGLQLRKLATESPNLRGVMLEGHGIICWGDTAKACYDNTIALIADAAAYLNERLAQGPAFGGEVTPPLAADDRAVLAAALMPRLRGLMRGARGKIGHFSDDPETLEFAGSRDFARLAAIGTSCPDHFLRTKIAPLTLDPARLDDEAYLADALEAYRQGYAAYYQRCAEPGDPAMRDPNPVVVLIPGIGRITFAADKTTARLAGEFYGNAINVMRGAEAIGDYIGLPEKEAYGIEYWALEEAKLQRMPKPRPLVGRIALVSGGAGGIGAATVRRLLQDGACVMLVDRDAEAAERVRAEMAQAFGKDVVRAETCDVTDERQVAAAFEACTREFGGLDILVANAGIASSASVEDTSVALWRRNYDVLTEGYFLSARAAFPLMRAVGGGSIVFIGSKNALAAAVNASAYASAKAASLHLARCLALEGAPHGIRVNTVNPDAVIKGSRIWDGDWRKERAGAHGIDPGSELEEHYRNRSMLKRDVLPEDVAEAVHFFASEASSKSTGNIVNVDAGNAQAFPR*