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SCN18_31_3_15_R1_B_scaffold_307_23

Organism: SCN18_31_3_15_R1_B_Nitrobacter_62_136

near complete RP 50 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(30426..30629)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDN1_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 1.10e-28
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 3.10e-29
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADU43965.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 1.50e-28

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGCAGAAGGGCACTGTCAAATGGTTCAACCCGACCAAGGGGTACGGATTCATCAAGCCGACGACCGGCGACAAGGACGTCTTCGTTCACATCTCAGCCGTGGAGCGGGCTGGTCTCAGCACCCTCAATGAGGATCAGGTGATCGAATACGATCTGGTCGAAAATCGCGGCAAGACCTCGGCTGAAAATCTGAAGGTCTCATAA
PROTEIN sequence
Length: 68
MQKGTVKWFNPTKGYGFIKPTTGDKDVFVHISAVERAGLSTLNEDQVIEYDLVENRGKTSAENLKVS*