ggKbase home page

SCN18_25_1_16_R2_B_scaffold_3292_8

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(4888..5304)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 137.0
  • Bit_score: 148
  • Evalue 5.60e-33
Ribonuclease VapC n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6XCL4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 137.0
  • Bit_score: 148
  • Evalue 4.00e-33
nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 120
  • Evalue 1.90e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGATCGTCGCCGACACCAACGTCGTCTCCGAGCTCATGAAGGACCGGCCCGACCCGGGCGTGCTCACGTGGGCGGCCGCGCTCGGCGAGAGCGAGGTGACGATCAGCGTCGTGACGGTTCAGGAGATCGCGCGAGGCCTGAGCCGCCTGCCGGACGGACGACGGCAGCGCACCCTGACCGGCCGCTGGCACCAGCTGCTCGAGTCTTACGCCGACACGATCCTCGTCTACGACCTACCCGCCGCACAGGCGGCCGCGACCGTCCTGGTCCACCGCGAGAGAGCCGGGCGGCCGATCAGCCTCGCCGACGCCGAGATCGCCGGGACCTGCGTGGCACAGGACGCCACCCTGGCCACCCGCAACACCGCCGACTTCACCGGCATCCCCGGCCTGACGCTCATCGACCCGTTCGCCTGA
PROTEIN sequence
Length: 139
VIVADTNVVSELMKDRPDPGVLTWAAALGESEVTISVVTVQEIARGLSRLPDGRRQRTLTGRWHQLLESYADTILVYDLPAAQAAATVLVHRERAGRPISLADAEIAGTCVAQDATLATRNTADFTGIPGLTLIDPFA*