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SCN18_25_1_16_R2_B_scaffold_4247_4

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 3084..3632

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B71D71 similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 145.0
  • Bit_score: 183
  • Evalue 1.90e-43
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82118.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 136.0
  • Bit_score: 137
  • Evalue 1.70e-29
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 147.0
  • Bit_score: 119
  • Evalue 5.70e-25

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGCCGGTCGCCTCCGTCGTGGTGCTCGGCCGCAGCATCCCGCCGCGGTCGCGGCGGAGGTGGCGGTGGCTTGACTTCGAGCGCTCGAAGTTTCCGATACTGGCGGACGTGCCCGAGGGATACACCATCGCCGCCGCGGCCGCCCGGTGCGGACTGCCGGAGACCACGCTGCGCTACTGGGAGGACATCGGCCTCGTCGCGCCGGTGCCCCGAGATCCGTCGAGCGGCCATCGCCGCTACCGGACCGCGGACGTCGAGCTGCTCGAGACGCTGGCCAACCTGCGTGCTGTCGGCCTGAGCATCGACGACATGCGCGCGTACCTCGCCGGCGCCGCCGACGCACCGGGCCAGCGGCGGGCGCTGTTCGAGGCGCACGCGCGGCGCCTGGCCGGGGAGGTGGCCGCGCTCCGGCTCCGGCTGCAGTACCTGGAGCTCAAGGTCCGGTACTGGACCGCGCGTGACGCCGGCGACGAGCAGGCGGCCGACGAGGTTGCCGCGGAGCTCGGCGCGGTCATCCGACAGATCAACCCGCGAGAGGCGGAATCGTGA
PROTEIN sequence
Length: 183
VPVASVVVLGRSIPPRSRRRWRWLDFERSKFPILADVPEGYTIAAAAARCGLPETTLRYWEDIGLVAPVPRDPSSGHRRYRTADVELLETLANLRAVGLSIDDMRAYLAGAADAPGQRRALFEAHARRLAGEVAALRLRLQYLELKVRYWTARDAGDEQAADEVAAELGAVIRQINPREAES*