ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_25_1_16_R2_B_scaffold_5511_4

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 3143..3679

Top 3 Functional Annotations

Value Algorithm Source
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21) similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 178.0
  • Bit_score: 269
  • Evalue 4.30e-70
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 181.0
  • Bit_score: 269
  • Evalue 2.10e-69
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H541_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 178.0
  • Bit_score: 269
  • Evalue 1.50e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCTGCCCAGCCTCTCGTCGGGATTCTCATGGGATCGGACTCCGACTGGCCGATCATGCAGGCGGCGGCCGACGCCCTCGCGGAGTTCGACGTGCCGGTCGAGGTGGACGTCATCTCGGCGCACCGCCAGCCGGACAAGGCCCTGGCGTTCGCGCGCTCGGCCGCCGGCCGTGGGCTGCGGGTCATCATCGCCGGCGCCGGTGGGGCCGCCCACCTGCCCGGGGTGCTGGCCGCCGTCACCACGCTGCCGGTCATCGGCGTGCCGGTGCCGCTGGCGCAGCTCGACGGGCTGGACTCGCTTCTCTCGATCGTGCAGATGCCGGCGGGCGTGCCGGTGGCGACGGTCGGCGTGGGCGCCGCGCGCAACGCGGGCCTGCTCGCGGTGCGGATGCTCGGTGCGGGGTCCGACGAGGTGGGCCAGCGGCTCGCGCCGGCCCTGGTGGCGTTCGCGCAGAACCTCACGGCCCAGGCCGACGCGAAGGGGGAGCGGCTGCGGGCGAAGCTCTCGGGGACGCCGACGGGGTTCAGCGCGTAG
PROTEIN sequence
Length: 179
MAAQPLVGILMGSDSDWPIMQAAADALAEFDVPVEVDVISAHRQPDKALAFARSAAGRGLRVIIAGAGGAAHLPGVLAAVTTLPVIGVPVPLAQLDGLDSLLSIVQMPAGVPVATVGVGAARNAGLLAVRMLGAGSDEVGQRLAPALVAFAQNLTAQADAKGERLRAKLSGTPTGFSA*