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SCN18_25_1_16_R2_B_scaffold_5511_5

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(3669..3989)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000368310E similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 99.0
  • Bit_score: 114
  • Evalue 6.40e-23
LuxR family transcriptional regulator {ECO:0000313|EMBL:EYT66134.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 104.0
  • Bit_score: 96
  • Evalue 1.90e-17
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 98.0
  • Bit_score: 86
  • Evalue 3.10e-15

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
GCGGTCGCGCACGGCCAGACGACGCTCGCACCGCAGGTCGGCGCCCGGCTGGTCGACGCCGCCGTCGGCCGGGCTGCCGCCCGGCCGACGGACGCCGCCGCGCTGCTGGCCCGCTTCCCGGTGCTGACGCCGCGCGAGGCGCAGGTGCTCGCCGAGATCGCCCGCGGCCGCACCAACCCCGAGATCGCCCGGCAGCTCTTCGTCGGCCTGGCAACGGTGAAGACGCACGTCAACGCCCTGTTCGCCAAGCTGGGCGTGGCGAGCCGGGCGCAGGCGATCGCGCTCGCCGTCGGGACCTCGCCCGGCGCGCCTACGCGCTGA
PROTEIN sequence
Length: 107
AVAHGQTTLAPQVGARLVDAAVGRAAARPTDAAALLARFPVLTPREAQVLAEIARGRTNPEIARQLFVGLATVKTHVNALFAKLGVASRAQAIALAVGTSPGAPTR*